Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_I11
         (438 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   0.64 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.6  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   3.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   4.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 114 SPLSPREHLRNFSITNQITPPGSG 185
           S + P+EHLR+  I   +  PG G
Sbjct: 333 SGIGPKEHLRSLGIPVVVDLPGVG 356


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 264  TRVRIPLSP*TTRQTAQSFRQTI*TLNHYPEV 169
            T    P  P   +Q  Q  +Q    LNHYP++
Sbjct: 1442 TLTSAPQQPQQQQQQQQQQQQQQQQLNHYPDL 1473


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 372 VTDNKLIWRQLIAELAGTFLL 434
           V D   +W   IA + GTF++
Sbjct: 484 VLDRLFLWIFTIASIVGTFII 504


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = +3

Query: 315 DYAMDEMQKKTSSIIGLSDVTDNKL-----IWRQLI 407
           DY  D ++ + S+I     +T+N L     +WR  +
Sbjct: 164 DYTYDSIEARDSAIFDGDFITENNLPLGLEVWRDKV 199


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/34 (29%), Positives = 11/34 (32%)
 Frame = -1

Query: 378 LSHLIDRXXXXXXXXSHPWRNPFSS*TNRNKKKP 277
           L HL  R           WRN     +NR    P
Sbjct: 253 LVHLYTRDQSETYDVLRSWRNLMDEHSNRTNSDP 286


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 7/36 (19%)
 Frame = +3

Query: 285 FCCDLFTMKTDYAMDEMQ-------KKTSSIIGLSD 371
           F  +LF M +DY  D ++       K  SS  GL D
Sbjct: 597 FAMELFVMVSDYKDDRVEQNEPIGCKDASSYCGLRD 632


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,151
Number of Sequences: 438
Number of extensions: 2211
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)