Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_I09
         (401 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY508412-1|AAS91579.1|  452|Drosophila melanogaster mitochondria...    74   8e-14
AY060616-1|AAL28164.1|  452|Drosophila melanogaster GH04071p pro...    74   8e-14
AE014297-1076|AAF54482.2|  452|Drosophila melanogaster CG3910-PA...    74   8e-14
AE014296-2359|AAF49758.2|  583|Drosophila melanogaster CG8100-PA...    27   9.4  

>AY508412-1|AAS91579.1|  452|Drosophila melanogaster mitochondrial
           transcription factorB2 protein.
          Length = 452

 Score = 73.7 bits (173), Expect = 8e-14
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +3

Query: 51  IYMYEISNHFFQHLHVLENQYPGRITFKIADFFGMWKRAFQDKMDHGNRIQELLGSLATN 230
           I + E  +HF   +  L   YP R+  +  DF  +WK  + DKMD G+R+ +LL  +   
Sbjct: 95  IILLESMDHFMPKIQELHTLYPERVKVRQGDFVNLWKLVYMDKMDGGSRVADLLSDVPQK 154

Query: 231 --NNDRIVKIIGSMPGLSFVRHLINNIVFHNTTNQLGRPDLFITMP 362
              +D  + + G++    F +HLIN+++F  +   LGR ++ + MP
Sbjct: 155 AFTDDINMLVFGAVGSYPFFKHLINSLIFQTSLFNLGRCEMILAMP 200


>AY060616-1|AAL28164.1|  452|Drosophila melanogaster GH04071p
           protein.
          Length = 452

 Score = 73.7 bits (173), Expect = 8e-14
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +3

Query: 51  IYMYEISNHFFQHLHVLENQYPGRITFKIADFFGMWKRAFQDKMDHGNRIQELLGSLATN 230
           I + E  +HF   +  L   YP R+  +  DF  +WK  + DKMD G+R+ +LL  +   
Sbjct: 95  IILLESMDHFMPKIQELHTLYPERVKVRQGDFVNLWKLVYMDKMDGGSRVADLLSDVPQK 154

Query: 231 --NNDRIVKIIGSMPGLSFVRHLINNIVFHNTTNQLGRPDLFITMP 362
              +D  + + G++    F +HLIN+++F  +   LGR ++ + MP
Sbjct: 155 AFTDDINMLVFGAVGSYPFFKHLINSLIFQTSLFNLGRCEMILAMP 200


>AE014297-1076|AAF54482.2|  452|Drosophila melanogaster CG3910-PA
           protein.
          Length = 452

 Score = 73.7 bits (173), Expect = 8e-14
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +3

Query: 51  IYMYEISNHFFQHLHVLENQYPGRITFKIADFFGMWKRAFQDKMDHGNRIQELLGSLATN 230
           I + E  +HF   +  L   YP R+  +  DF  +WK  + DKMD G+R+ +LL  +   
Sbjct: 95  IILLESMDHFMPKIQELHTLYPERVKVRQGDFVNLWKLVYMDKMDGGSRVADLLSDVPQK 154

Query: 231 --NNDRIVKIIGSMPGLSFVRHLINNIVFHNTTNQLGRPDLFITMP 362
              +D  + + G++    F +HLIN+++F  +   LGR ++ + MP
Sbjct: 155 AFTDDINMLVFGAVGSYPFFKHLINSLIFQTSLFNLGRCEMILAMP 200


>AE014296-2359|AAF49758.2|  583|Drosophila melanogaster CG8100-PA
           protein.
          Length = 583

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 231 NNDRIVKIIGSMPGLSFVRHLINNIVFHNT 320
           + DR+V   GS   ++F +HL     FHNT
Sbjct: 212 DGDRLVAFRGSFDEVNFKKHLALGSHFHNT 241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,939,884
Number of Sequences: 53049
Number of extensions: 382722
Number of successful extensions: 749
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)