Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_I05
         (294 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56637-1|AAC00533.1|  286|Homo sapiens capping protein alpha sub...    31   0.89 
CR541819-1|CAG46618.1|  286|Homo sapiens CAPZA1 protein.               31   0.89 
CR407657-1|CAG28585.1|  286|Homo sapiens CAPZA1 protein.               31   0.89 
BT019364-1|AAV38171.1|  286|Homo sapiens capping protein (actin ...    31   0.89 
BC000144-1|AAH00144.1|  286|Homo sapiens capping protein (actin ...    31   0.89 
AL929470-7|CAI16528.1|  286|Homo sapiens capping protein (actin ...    31   0.89 
AL603832-1|CAI14054.1|  286|Homo sapiens capping protein (actin ...    31   0.89 
AK223226-1|BAD96946.1|  286|Homo sapiens F-actin capping protein...    31   0.89 

>U56637-1|AAC00533.1|  286|Homo sapiens capping protein alpha
           subunit isoform 1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>CR541819-1|CAG46618.1|  286|Homo sapiens CAPZA1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>CR407657-1|CAG28585.1|  286|Homo sapiens CAPZA1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>BT019364-1|AAV38171.1|  286|Homo sapiens capping protein (actin
           filament) muscle Z-line, alpha 1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>BC000144-1|AAH00144.1|  286|Homo sapiens capping protein (actin
           filament) muscle Z-line, alpha 1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>AL929470-7|CAI16528.1|  286|Homo sapiens capping protein (actin
           filament) muscle Z-line, alpha 1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>AL603832-1|CAI14054.1|  286|Homo sapiens capping protein (actin
           filament) muscle Z-line, alpha 1 protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


>AK223226-1|BAD96946.1|  286|Homo sapiens F-actin capping protein
           alpha-1 subunit variant protein.
          Length = 286

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 265 AKPRTHKYPNIFNTIYSNIRIKIRHD*ILKSFSDLLKSNYNVTIFT 128
           AK  TH  P  FN +++++R+ + +D +L+  +    + YN+  FT
Sbjct: 18  AKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFT 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,754,144
Number of Sequences: 237096
Number of extensions: 703580
Number of successful extensions: 1144
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)