Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_I02
(470 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 303 8e-85
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 300 4e-84
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 183 1e-48
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 150 8e-39
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.71
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 2.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 3.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.7
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 8.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 8.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 303 bits (743), Expect = 8e-85
Identities = 142/144 (98%), Positives = 143/144 (99%)
Frame = +1
Query: 37 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 396
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 397 GEFEAGISKNGQTREHALLAFTLG 468
GEFEAGISKNGQTREHALLAFTLG
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLG 144
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 300 bits (737), Expect = 4e-84
Identities = 141/144 (97%), Positives = 142/144 (98%)
Frame = +1
Query: 37 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 396
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 397 GEFEAGISKNGQTREHALLAFTLG 468
GEFEAGISKNGQTREHALLAFTLG
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLG 144
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 183 bits (445), Expect = 1e-48
Identities = 86/87 (98%), Positives = 86/87 (98%)
Frame = +1
Query: 208 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 387
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 388 AGTGEFEAGISKNGQTREHALLAFTLG 468
AGTGEFEAGISKNGQTREHALLAFTLG
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLG 87
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 150 bits (363), Expect = 8e-39
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = +1
Query: 256 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 435
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 436 REHALLAFTLG 468
REHALLAFTLG
Sbjct: 61 REHALLAFTLG 71
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 295 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 399
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 24.6 bits (51), Expect = 0.54
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 49 KVHINIVVIGHVDSGKST 102
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.71
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 58 INIVVIGHVDSGKST 102
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 280 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 381
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 3.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 280 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 381
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 139 DKRTIEKFEKEAQEMG 186
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 139 DKRTIEKFEKEAQEMG 186
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 139 DKRTIEKFEKEAQEMG 186
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 8.8
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 154 RWYVCRYHRIC 122
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 8.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 122 TNAVVSTNVPSKSSRRKPRKWVRVPSNTLGYWTN 223
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 213 YPSVFEGTLTHFLG 172
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,221
Number of Sequences: 438
Number of extensions: 2781
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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