Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_I01
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017377-1|AAH17377.1| 515|Homo sapiens male sterility domain c... 122 1e-27
AY600449-1|AAT42129.1| 515|Homo sapiens fatty acyl CoA reductas... 122 1e-27
AY423606-1|AAR84086.1| 515|Homo sapiens putative fatty acyl red... 122 1e-27
AY358784-1|AAQ89144.1| 515|Homo sapiens VSIP2423 protein. 122 1e-27
AK026381-1|BAB15467.1| 342|Homo sapiens protein ( Homo sapiens ... 122 1e-27
BC022267-1|AAH22267.1| 515|Homo sapiens male sterility domain c... 103 4e-22
AK027756-1|BAB55347.1| 515|Homo sapiens protein ( Homo sapiens ... 103 4e-22
AK001324-1|BAA91625.1| 515|Homo sapiens protein ( Homo sapiens ... 103 4e-22
AK001927-1|BAA91983.1| 515|Homo sapiens protein ( Homo sapiens ... 100 3e-21
BC107873-1|AAI07874.1| 326|Homo sapiens poliovirus receptor rel... 31 3.4
BC073861-1|AAH73861.1| 326|Homo sapiens poliovirus receptor rel... 31 3.4
BC001129-1|AAH01129.1| 326|Homo sapiens poliovirus receptor rel... 31 3.4
>BC017377-1|AAH17377.1| 515|Homo sapiens male sterility domain
containing 2 protein.
Length = 515
Score = 122 bits (293), Expect = 1e-27
Identities = 59/130 (45%), Positives = 91/130 (70%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKLL SCP ++ +Y+L+R K G P+ER+ ++ S FDRLR E P F E K+
Sbjct: 23 GKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFRE-KIIA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I+ ++ + L +S ED+ ++I TNIIFH AA+VRF++ L+ AV+LN++ T+Q++ LA+
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 504 VVNLSALVHV 533
+ NL +HV
Sbjct: 142 MKNLEVFMHV 151
>AY600449-1|AAT42129.1| 515|Homo sapiens fatty acyl CoA reductase 1
protein.
Length = 515
Score = 122 bits (293), Expect = 1e-27
Identities = 59/130 (45%), Positives = 91/130 (70%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKLL SCP ++ +Y+L+R K G P+ER+ ++ S FDRLR E P F E K+
Sbjct: 23 GKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFRE-KIIA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I+ ++ + L +S ED+ ++I TNIIFH AA+VRF++ L+ AV+LN++ T+Q++ LA+
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 504 VVNLSALVHV 533
+ NL +HV
Sbjct: 142 MKNLEVFMHV 151
>AY423606-1|AAR84086.1| 515|Homo sapiens putative fatty acyl
reductase protein.
Length = 515
Score = 122 bits (293), Expect = 1e-27
Identities = 59/130 (45%), Positives = 91/130 (70%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKLL SCP ++ +Y+L+R K G P+ER+ ++ S FDRLR E P F E K+
Sbjct: 23 GKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFRE-KIIA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I+ ++ + L +S ED+ ++I TNIIFH AA+VRF++ L+ AV+LN++ T+Q++ LA+
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 504 VVNLSALVHV 533
+ NL +HV
Sbjct: 142 MKNLEVFMHV 151
>AY358784-1|AAQ89144.1| 515|Homo sapiens VSIP2423 protein.
Length = 515
Score = 122 bits (293), Expect = 1e-27
Identities = 59/130 (45%), Positives = 91/130 (70%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKLL SCP ++ +Y+L+R K G P+ER+ ++ S FDRLR E P F E K+
Sbjct: 23 GKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFRE-KIIA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I+ ++ + L +S ED+ ++I TNIIFH AA+VRF++ L+ AV+LN++ T+Q++ LA+
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 504 VVNLSALVHV 533
+ NL +HV
Sbjct: 142 MKNLEVFMHV 151
>AK026381-1|BAB15467.1| 342|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22728 fis, clone HSI15617. ).
Length = 342
Score = 122 bits (293), Expect = 1e-27
Identities = 59/130 (45%), Positives = 91/130 (70%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKLL SCP ++ +Y+L+R K G P+ER+ ++ S FDRLR E P F E K+
Sbjct: 23 GKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDFRE-KIIA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I+ ++ + L +S ED+ ++I TNIIFH AA+VRF++ L+ AV+LN++ T+Q++ LA+
Sbjct: 82 INSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQ 141
Query: 504 VVNLSALVHV 533
+ NL +HV
Sbjct: 142 MKNLEVFMHV 151
>BC022267-1|AAH22267.1| 515|Homo sapiens male sterility domain
containing 1 protein.
Length = 515
Score = 103 bits (247), Expect = 4e-22
Identities = 53/130 (40%), Positives = 82/130 (63%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKL + PDL IY+L+R K G ++R+ Q+ + F++++ P E K+
Sbjct: 23 GKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVKEVCPNVHE-KIRA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I D+ ++ IS ED L+S TNIIFH AA+VRFDD L+ AV+LN+ T+Q++ +A
Sbjct: 82 IYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQ 141
Query: 504 VVNLSALVHV 533
+ L A +H+
Sbjct: 142 MPKLEAFIHI 151
>AK027756-1|BAB55347.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ14850 fis, clone PLACE1000636, weakly similar to
MALE STERILITY PROTEIN 2. ).
Length = 515
Score = 103 bits (247), Expect = 4e-22
Identities = 53/130 (40%), Positives = 82/130 (63%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKL + PDL IY+L+R K G ++R+ Q+ + F++++ P E K+
Sbjct: 23 GKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVKEVCPNVHE-KIRA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I D+ ++ IS ED L+S TNIIFH AA+VRFDD L+ AV+LN+ T+Q++ +A
Sbjct: 82 IYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQ 141
Query: 504 VVNLSALVHV 533
+ L A +H+
Sbjct: 142 MPKLEAFIHI 151
>AK001324-1|BAA91625.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ10462 fis, clone NT2RP1001494, weakly similar to
MALE STERILITY PROTEIN 2. ).
Length = 515
Score = 103 bits (247), Expect = 4e-22
Identities = 53/130 (40%), Positives = 82/130 (63%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKL + PDL IY+L+R K G ++R+ Q+ + F++++ P E K+
Sbjct: 23 GKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVKEVCPNVHE-KIRA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I D+ ++ IS ED L+S TNIIFH AA+VRFDD L+ AV+LN+ T+Q++ +A
Sbjct: 82 IYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQ 141
Query: 504 VVNLSALVHV 533
+ L A +H+
Sbjct: 142 MPKLEAFIHI 151
>AK001927-1|BAA91983.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ11065 fis, clone PLACE1004868, weakly similar to
MALE STERILITY PROTEIN 2. ).
Length = 515
Score = 100 bits (240), Expect = 3e-21
Identities = 52/130 (40%), Positives = 81/130 (62%)
Frame = +3
Query: 144 GSVLVEKLLYSCPDLDRIYLLLRTKRGVNPEERLTQLYSTACFDRLRTERPGFFESKVHV 323
G VL+EKL + PDL IY+L+R K G ++ + Q+ + F++++ P E K+
Sbjct: 23 GKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQGVFQILDSKLFEKVKEVCPNVHE-KIRA 81
Query: 324 ISGDVMEDGLGISAEDRILLISQTNIIFHVAASVRFDDPLKFAVKLNLLGTKQIVDLAKC 503
I D+ ++ IS ED L+S TNIIFH AA+VRFDD L+ AV+LN+ T+Q++ +A
Sbjct: 82 IYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQ 141
Query: 504 VVNLSALVHV 533
+ L A +H+
Sbjct: 142 MPKLEAFIHI 151
>BC107873-1|AAI07874.1| 326|Homo sapiens poliovirus receptor
related immunoglobulin domain containing protein.
Length = 326
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 360 IYLIHLPSRHQI*RELLIQKSPASPF*ACRNKQWNTAASIFPQDSLHVLFSGVNKFC 190
+YL+HL RH+ +Q S SP A R + W A S Q +LHV ++ +N C
Sbjct: 187 VYLLHLLRRHKHRPAPRLQPSRTSPQ-APRARAW--APSQASQAALHVPYATINTSC 240
>BC073861-1|AAH73861.1| 326|Homo sapiens poliovirus receptor
related immunoglobulin domain containing protein.
Length = 326
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 360 IYLIHLPSRHQI*RELLIQKSPASPF*ACRNKQWNTAASIFPQDSLHVLFSGVNKFC 190
+YL+HL RH+ +Q S SP A R + W A S Q +LHV ++ +N C
Sbjct: 187 VYLLHLLRRHKHRPAPRLQPSRTSPQ-APRARAW--APSQASQAALHVPYATINTSC 240
>BC001129-1|AAH01129.1| 326|Homo sapiens poliovirus receptor
related immunoglobulin domain containing protein.
Length = 326
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2
Query: 360 IYLIHLPSRHQI*RELLIQKSPASPF*ACRNKQWNTAASIFPQDSLHVLFSGVNKFC 190
+YL+HL RH+ +Q S SP A R + W A S Q +LHV ++ +N C
Sbjct: 187 VYLLHLLRRHKHRPAPRLQPSRTSPQ-APRARAW--APSQASQAALHVPYATINTSC 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,947,406
Number of Sequences: 237096
Number of extensions: 1481596
Number of successful extensions: 2367
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2358
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -