Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H24
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    24   1.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.6  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -3

Query: 234 LWVSVAYNRPKXXXXXXXXVAFELDPVLLLLVDASRSSRASNAV 103
           LW+S  Y  P+           ++DPV   L D  R  R + ++
Sbjct: 69  LWLSPIYKSPQVDFGYDISNFTDVDPVYGTLADFDRLVRRAKSL 112


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +2

Query: 188 LRDLYLGLLY--ATDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALY 361
           + +LY G++Y   +D  + Y   T +          T PS    + A  + AL +L  ++
Sbjct: 160 INELYPGVVYKCVSDNGESYAKFTISVTIDGETFEGTGPSKKLAKAAASKAALAKLRNVH 219

Query: 362 ADAICNP 382
           + + C P
Sbjct: 220 SSSFCIP 226


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 348 YMLCMLMPFVIHSIFREIR 404
           Y+ C++M F+ ++IF+ +R
Sbjct: 353 YIPCIIMVFLYYNIFKALR 371


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -2

Query: 421 EFQRSYLISRKMEWITNGISIQSM*STKSSPYFSVPD-ITTARRCRTRYKH 272
           E +  + + +    I +GI         SSPYF+ P  + T ++  T   H
Sbjct: 778 EDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLH 828


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = -2

Query: 421 EFQRSYLISRKMEWITNGISIQSM*STKSSPYFSVPD-ITTARRCRTRYKH 272
           E +  + + +    I +GI         SSPYF+ P  + T ++  T   H
Sbjct: 774 EDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLH 824


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,208
Number of Sequences: 438
Number of extensions: 2565
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)