Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H21
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   0.61 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   4.3  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   4.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   4.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   5.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.7  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    20   9.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   9.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   9.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 0.61
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 280 CSGYCRGGPSLRWFDITGD 336
           CS  C     LRWF+I  D
Sbjct: 19  CSVRCSAASGLRWFEIWRD 37


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 101 ANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELRDAA 217
           +NEDE +  L   VVI  D S E  L    E    R +A
Sbjct: 434 SNEDEDETPLDPVVVISNDKSTEFFLATVVEEAACRFSA 472


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 238 W*NKEVYTIPGWR 276
           W NK   T+P WR
Sbjct: 75  WRNKLFVTVPRWR 87


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 4  RGSG*LQSKF*ENACIVFGIM 66
          R S  LQ++   ++C++FG++
Sbjct: 2  RASSVLQAESDVSSCVIFGVL 22


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 4  RGSG*LQSKF*ENACIVFGIM 66
          R S  LQ++   ++C++FG++
Sbjct: 2  RASSVLQAESDVSSCVIFGVL 22


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 121 FPFIFIRRPWCSPASYHHA 65
           FP  +I  PW +P +   A
Sbjct: 456 FPTRYIHEPWNAPLNVQRA 474


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 90  AALQATTMHNTKHNTRIFSKF 28
           + L +T  + +KHNT+ F+++
Sbjct: 378 SCLGSTETYYSKHNTQQFTQY 398


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
          precursor protein.
          Length = 175

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 61 YQTQYTHFLKIYSEVIRIL 5
          YQT  TH  K+  ++  IL
Sbjct: 41 YQTLQTHMKKVREQMAGIL 59


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 6/25 (24%), Positives = 12/25 (48%)
 Frame = +3

Query: 54  VWYYAWW*LAGLHQGRRMKMKGNWS 128
           +W++ W     L  G  +K   +W+
Sbjct: 1   MWHFLWIVFLALANGEEIKTIYSWN 25


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 273 ALVFRLLPWWPFS 311
           A V+R  PW PF+
Sbjct: 550 APVWRFQPWGPFT 562


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 95  LVQPCKLPPCIIPNTI 48
           L  PCK P  I+P  +
Sbjct: 66  LSNPCKHPTIIMPQDV 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,302
Number of Sequences: 438
Number of extensions: 1441
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)