Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_H20
(179 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 0.34
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 0.34
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 0.59
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 3.1
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 19 4.1
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 19 4.1
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 19 4.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 19 4.1
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 19 5.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 19 5.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 19 5.5
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 19 5.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 19 5.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 18 9.6
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 23.0 bits (47), Expect = 0.34
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 124 SSRIEGYNSGSTLLHHKWTPYFSIF 50
+S+++ Y + +LH WT Y +F
Sbjct: 88 TSKLKIYKWNNQILHILWTSYKKVF 112
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 23.0 bits (47), Expect = 0.34
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 124 SSRIEGYNSGSTLLHHKWTPYFSIF 50
+S+++ Y + +LH WT Y +F
Sbjct: 71 TSKLKIYKWNNQILHILWTSYKKVF 95
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 0.59
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 124 SSRIEGYNSGSTLLHHKWTPYFSIFR 47
SS+ G+ ++H WTP+F ++
Sbjct: 447 SSKSSGWRKLRNIVH--WTPFFQTYK 470
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 1.8
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -3
Query: 177 IDLWLAGC 154
+D+W+AGC
Sbjct: 262 LDVWMAGC 269
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 104 VTLYSRREQQNFAYWPGHPANQ 169
V + + R ++ Y+P HP+ Q
Sbjct: 376 VLMRTVRGKEKTCYYPYHPSTQ 397
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 104 VTLYSRREQQNFAYWPGHPANQ 169
V + + R ++ Y+P HP+ Q
Sbjct: 376 VLMRTVRGKEKTCYYPYHPSTQ 397
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 122 REQQNFAYWPGHPAN 166
+EQ +YW G+ AN
Sbjct: 65 KEQGFLSYWRGNLAN 79
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 122 REQQNFAYWPGHPAN 166
+EQ +YW G+ AN
Sbjct: 65 KEQGFLSYWRGNLAN 79
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 128 QQNFAYWPGHPANQ 169
Q+ + Y+PG P +
Sbjct: 101 QERYEYFPGFPGEE 114
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +2
Query: 128 QQNFAYWPGHPANQ 169
Q+ + Y+PG P +
Sbjct: 101 QERYEYFPGFPGEE 114
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -2
Query: 169 LVGWMSWP 146
L GW WP
Sbjct: 172 LAGWNDWP 179
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -2
Query: 169 LVGWMSWP 146
L GW WP
Sbjct: 172 LAGWNDWP 179
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.5
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -2
Query: 169 LVGWMSWP 146
L GW WP
Sbjct: 172 LAGWNDWP 179
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = -2
Query: 109 GYNSGSTLLHHKWTPYFSIFR 47
G+ ++H WTP+F ++
Sbjct: 218 GWRKLRNIVH--WTPFFQTYK 236
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = -2
Query: 109 GYNSGSTLLHHKWTPYFSIFR 47
G+ ++H WTP+F ++
Sbjct: 133 GWRKLRNIVH--WTPFFQTYK 151
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 26 KSIQVQKPKNGKVWRPLVV 82
+S +Q N +W+PL V
Sbjct: 744 QSTVIQTGANVNLWQPLSV 762
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,848
Number of Sequences: 438
Number of extensions: 1010
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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