Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_H19
(298 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025275-1|AAH25275.1| 483|Homo sapiens ATPase, H+ transporting... 89 2e-18
AF298777-1|AAG22809.1| 483|Homo sapiens vacuolar ATPase subunit... 89 2e-18
AF132945-1|AAD27720.1| 483|Homo sapiens CGI-11 protein protein. 89 2e-18
AF112204-1|AAF17192.1| 483|Homo sapiens Vacuolar proton pump su... 89 2e-18
AF125105-1|AAL75942.1| 476|Homo sapiens vacuolar proton pump su... 88 4e-18
AL139244-2|CAI18990.1| 569|Homo sapiens novel protein protein. 29 2.0
CR589924-4|CAM28370.1| 162|Homo sapiens novel protein similar t... 29 3.6
BX537114-1|CAI13084.2| 162|Homo sapiens novel protein similar t... 29 3.6
BC132874-1|AAI32875.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase ac... 29 3.6
BC132872-1|AAI32873.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase ac... 29 3.6
AL078463-1|CAI20334.2| 162|Homo sapiens novel protein similar t... 29 3.6
AB007925-1|BAA32301.1| 1095|Homo sapiens KIAA0456 protein protein. 29 3.6
Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein. 28 6.2
U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein. 28 6.2
BC112927-1|AAI12928.1| 458|Homo sapiens SRGAP2P1 protein protein. 28 6.2
>BC025275-1|AAH25275.1| 483|Homo sapiens ATPase, H+ transporting,
lysosomal 50/57kDa, V1 subunit H protein.
Length = 483
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 RASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRG----QKDLPDKNPDACADVFLNLL 177
+A+E+R ++NWQSYLQGQMI+ D +FI + + ++++ CA F+NL+
Sbjct: 22 KAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLM 81
Query: 178 THISKDHTIQYILVLIDDILSEDKSRVKIF 267
THI K+ T+QYIL ++DD+L E+ RV IF
Sbjct: 82 THICKEQTVQYILTMVDDMLQENHQRVSIF 111
>AF298777-1|AAG22809.1| 483|Homo sapiens vacuolar ATPase subunit H
protein.
Length = 483
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 RASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRG----QKDLPDKNPDACADVFLNLL 177
+A+E+R ++NWQSYLQGQMI+ D +FI + + ++++ CA F+NL+
Sbjct: 22 KAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLM 81
Query: 178 THISKDHTIQYILVLIDDILSEDKSRVKIF 267
THI K+ T+QYIL ++DD+L E+ RV IF
Sbjct: 82 THICKEQTVQYILTMVDDMLQENHQRVSIF 111
>AF132945-1|AAD27720.1| 483|Homo sapiens CGI-11 protein protein.
Length = 483
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 RASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRG----QKDLPDKNPDACADVFLNLL 177
+A+E+R ++NWQSYLQGQMI+ D +FI + + ++++ CA F+NL+
Sbjct: 22 KAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLM 81
Query: 178 THISKDHTIQYILVLIDDILSEDKSRVKIF 267
THI K+ T+QYIL ++DD+L E+ RV IF
Sbjct: 82 THICKEQTVQYILTMVDDMLQENHQRVSIF 111
>AF112204-1|AAF17192.1| 483|Homo sapiens Vacuolar proton pump
subunit SFD alpha isoform protein.
Length = 483
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 RASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRG----QKDLPDKNPDACADVFLNLL 177
+A+E+R ++NWQSYLQGQMI+ D +FI + + ++++ CA F+NL+
Sbjct: 22 KAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLM 81
Query: 178 THISKDHTIQYILVLIDDILSEDKSRVKIF 267
THI K+ T+QYIL ++DD+L E+ RV IF
Sbjct: 82 THICKEQTVQYILTMVDDMLQENHQRVSIF 111
>AF125105-1|AAL75942.1| 476|Homo sapiens vacuolar proton pump
subunit SFD alpha isoform protein.
Length = 476
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Frame = +1
Query: 10 RASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRG----QKDLPDKNPDACADVFLNLL 177
+A+E+R ++NWQSYLQGQMI+ D +FI + ++++ CA F+NL+
Sbjct: 22 KAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMERSPEEKQEMLQTEGSQCAKTFINLM 81
Query: 178 THISKDHTIQYILVLIDDILSEDKSRVKIF 267
THI K+ T+QYIL ++DD+L E+ RV IF
Sbjct: 82 THICKEQTVQYILTMVDDMLQENHQRVSIF 111
>AL139244-2|CAI18990.1| 569|Homo sapiens novel protein protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 22 IRQTQINWQSYLQGQMITQRDHDFIVNLDQRGQKDLPDKNPDACADVFLNLLTHI 186
+R ++NWQ+Y I R + + + G +PD+N ACA L + +
Sbjct: 325 LRDPELNWQAYCTRAKIHIRAYLHDLKRAKMGLGGMPDRNHLACAKADLEEVVRV 379
>CR589924-4|CAM28370.1| 162|Homo sapiens novel protein similar to
SLIT-ROBO Rho GTPase activating protein 2 SRGAP2
protein.
Length = 162
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 83 DQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 142
Query: 277 KYSG 288
K G
Sbjct: 143 KEVG 146
>BX537114-1|CAI13084.2| 162|Homo sapiens novel protein similar to
SLIT-ROBO Rho GTPase activating protein 2 SRGAP2
protein.
Length = 162
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 83 DQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 142
Query: 277 KYSG 288
K G
Sbjct: 143 KEVG 146
>BC132874-1|AAI32875.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase
activating protein 2 protein.
Length = 1071
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 83 DQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 142
Query: 277 KYSG 288
K G
Sbjct: 143 KEVG 146
>BC132872-1|AAI32873.1| 1071|Homo sapiens SLIT-ROBO Rho GTPase
activating protein 2 protein.
Length = 1071
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 83 DQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 142
Query: 277 KYSG 288
K G
Sbjct: 143 KEVG 146
>AL078463-1|CAI20334.2| 162|Homo sapiens novel protein similar to
SLIT-ROBO Rho GTPase activating protein 2 SRGAP2
protein.
Length = 162
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 83 DQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 142
Query: 277 KYSG 288
K G
Sbjct: 143 KEVG 146
>AB007925-1|BAA32301.1| 1095|Homo sapiens KIAA0456 protein protein.
Length = 1095
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 107 DQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 166
Query: 277 KYSG 288
K G
Sbjct: 167 KEVG 170
>Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.
Length = 2214
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 211 ILVLIDDILSEDKSRVKIFRESKYSGN 291
I V ++I +D S++ IFR SKYSG+
Sbjct: 966 IAVFKNEIYWDDWSQLSIFRASKYSGS 992
>U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.
Length = 2214
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 211 ILVLIDDILSEDKSRVKIFRESKYSGN 291
I V ++I +D S++ IFR SKYSG+
Sbjct: 966 IAVFKNEIYWDDWSQLSIFRASKYSGS 992
>BC112927-1|AAI12928.1| 458|Homo sapiens SRGAP2P1 protein protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 106 DQRGQKDLPDKNPDACADVFLNLLTHISKDHTIQ---YILVLIDDILSEDKSRVKIFRES 276
DQ+ +KD +P C ++ LN + S+DHT Y+ +I + + ++F++S
Sbjct: 83 DQQFKKDQNVLSPVNCWNLLLNQVKWESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKS 142
Query: 277 KYSG 288
K G
Sbjct: 143 KEVG 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,035,976
Number of Sequences: 237096
Number of extensions: 744005
Number of successful extensions: 1281
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 76,859,062
effective HSP length: 75
effective length of database: 59,076,862
effective search space used: 1358767826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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