Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_H16
(552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical pr... 114 3e-26
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 114 5e-26
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 49 3e-06
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 49 3e-06
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 46 2e-05
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 46 2e-05
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical ... 29 1.7
U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protea... 29 2.9
L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-lik... 29 2.9
L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-lik... 29 2.9
AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical ... 28 3.9
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z92786-8|CAB07210.1| 325|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z73906-6|CAA98113.1| 824|Caenorhabditis elegans Hypothetical protein
D2030.6 protein.
Length = 824
Score = 114 bits (275), Expect = 3e-26
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Frame = +2
Query: 5 EVRMSKPEIVTIRMDSATEYGNMCEATIAK---RNPAMILCVLARNSPDRYESIKKKCTV 175
+V++ +P V IR S +Y + I + + M++ +LA ++ RY+S+KK V
Sbjct: 462 QVQLGEPMCVPIRGISPNDYLEGVKGAIKQVDGEDIHMLVVMLADDNKTRYDSLKKFLCV 521
Query: 176 DRAVPTQVVCARNMTSKSAM--------SIATKVAIQMNCKLGGAPWTVEIPLPSLIVIG 331
+ +P Q V R + KS SI K+ +QM CK GGA W V IPL + +++G
Sbjct: 522 ECPIPNQCVNLRTLAGKSKDGGENKNLGSIVLKIVLQMICKTGGALWKVNIPLKNTMIVG 581
Query: 332 YDVCHDPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERN 511
YD+ HD K K+ GA V+T + TQ+YS H + +L ++ + ALK++ + N
Sbjct: 582 YDLYHDSTLKGKTVGACVSTTSNDFTQFYSQTRPHENPTQLGNNLTHFVRKALKQYYDSN 641
Query: 512 G-NLPTRIFIYRDG 550
LP+R+ +YRDG
Sbjct: 642 DQTLPSRLILYRDG 655
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 114 bits (274), Expect = 5e-26
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 12/194 (6%)
Frame = +2
Query: 5 EVRMSKPEIVTIRMDSATEYGNMCEATIAKRNPA---MILCVLARNSPDRYESIKKKCTV 175
+V++ +P V I S +Y +A I + M++ +LA ++ RY+S+KK V
Sbjct: 360 QVQLGEPMCVKINGISPNDYLEGLKAAIKSVDGEEIHMLVVMLADDNKTRYDSLKKYLCV 419
Query: 176 DRAVPTQVVCARNMTSKSAM--------SIATKVAIQMNCKLGGAPWTVEIPLPSLIVIG 331
+ +P Q V R + KS SI K+ +QM CK GGA W V IPL S +++G
Sbjct: 420 ECPIPNQCVNLRTLAGKSKDGGENKNLGSIVLKIVLQMICKTGGALWKVNIPLKSTMIVG 479
Query: 332 YDVCHDPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERN 511
YD+ HD K K+ GA V+T + TQ+YS H + +L ++ + +LK++ + N
Sbjct: 480 YDLYHDSTLKGKTVGACVSTTSNDFTQFYSQTRPHENPTQLGNNLTHFVRKSLKQYYDNN 539
Query: 512 G-NLPTRIFIYRDG 550
LP+R+ +YRDG
Sbjct: 540 DKTLPSRLILYRDG 553
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical protein
F48F7.1 protein.
Length = 1002
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Frame = +2
Query: 107 MILCVLARNSPDRYESIKKKCTVDRAVPTQVVCARNMTSKSAMSIATKVAIQMNCKLGGA 286
+++ VL +P Y +K+ + TQ V A+N + +++ + ++MN KLGG
Sbjct: 660 LVVVVLPGKTPV-YAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSN-LCLKMNVKLGGV 717
Query: 287 PWTVEIP--LPSL-----IVIGYDVCHDPR--FKEKSYGAFVATLDKNLTQYYSAVNAHT 439
++ +P P + I G D+ H P ++ S A V ++D + ++Y + V
Sbjct: 718 N-SILLPNVRPRIFNEPVIFFGCDITHPPAGDSRKPSIAAVVGSMDAHPSRYAATVRVQQ 776
Query: 440 SGEELSGHMGFNIVCALKKFRERNGNLPTRIFIYRDG 550
+E+ + + + L +F P RI +YRDG
Sbjct: 777 HRQEIISDLTYMVRELLVQFYRNTRFKPARIVVYRDG 813
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical protein
F48F7.1 protein.
Length = 1002
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Frame = +2
Query: 107 MILCVLARNSPDRYESIKKKCTVDRAVPTQVVCARNMTSKSAMSIATKVAIQMNCKLGGA 286
+++ VL +P Y +K+ + TQ V A+N + +++ + ++MN KLGG
Sbjct: 660 LVVVVLPGKTPV-YAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSN-LCLKMNVKLGGV 717
Query: 287 PWTVEIP--LPSL-----IVIGYDVCHDPR--FKEKSYGAFVATLDKNLTQYYSAVNAHT 439
++ +P P + I G D+ H P ++ S A V ++D + ++Y + V
Sbjct: 718 N-SILLPNVRPRIFNEPVIFFGCDITHPPAGDSRKPSIAAVVGSMDAHPSRYAATVRVQQ 776
Query: 440 SGEELSGHMGFNIVCALKKFRERNGNLPTRIFIYRDG 550
+E+ + + + L +F P RI +YRDG
Sbjct: 777 HRQEIISDLTYMVRELLVQFYRNTRFKPARIVVYRDG 813
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Frame = +2
Query: 107 MILCVLARNSPDRYESIKKKCTVDRAVPTQVVCARNMTSKSAMSIATKVAIQMNCKLGGA 286
+++ VL +P Y +K+ + TQ V A+N + +++ + ++MN KLGG
Sbjct: 668 LVVVVLPGKTPV-YAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSN-LCLKMNVKLGGV 725
Query: 287 PWTVEIP--LPSL-----IVIGYDVCHDPR--FKEKSYGAFVATLDKNLTQYYSAVNAHT 439
++ +P P + I G D+ H P ++ S A V ++D + ++Y + V
Sbjct: 726 N-SILLPNVRPRIFNEPVIFFGCDITHPPAGDSRKPSIAAVVGSMDAHPSRYAATVRVQQ 784
Query: 440 SGEELSGHMGFNIVCALKKFRERNGNLPTRIFIYRDG 550
+E+ + + + L +F P RI +YRDG
Sbjct: 785 HRQEIISDLTYMVRELLVQFYRNTRFKPARIVVYRDG 821
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Frame = +2
Query: 107 MILCVLARNSPDRYESIKKKCTVDRAVPTQVVCARNMTSKSAMSIATKVAIQMNCKLGGA 286
+I+ VL +P Y +K+ + TQ V A+N + +++ + ++MN KLGG
Sbjct: 547 LIVVVLPGKTPI-YAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSN-LCLKMNVKLGGV 604
Query: 287 PWTVEIP--LPSL-----IVIGYDVCHDPR--FKEKSYGAFVATLDKNLTQYYSAVNAHT 439
++ +P P + I +G D+ H ++ S A V ++D + ++Y + V
Sbjct: 605 N-SILLPNVRPRIFNEPVIFLGCDITHPAAGDTRKPSIAAVVGSMDAHPSRYAATVRVQQ 663
Query: 440 SGEELSGHMGFNIVCALKKFRERNGNLPTRIFIYRDG 550
+E+ + + + L +F P RI +YRDG
Sbjct: 664 HRQEIITDLTYMVRELLVQFYRNTRFKPARIVVYRDG 700
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Frame = +2
Query: 107 MILCVLARNSPDRYESIKKKCTVDRAVPTQVVCARNMTSKSAMSIATKVAIQMNCKLGGA 286
+I+ VL +P Y +K+ + TQ V A+N + +++ + ++MN KLGG
Sbjct: 566 LIVVVLPGKTPI-YAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSN-LCLKMNVKLGGV 623
Query: 287 PWTVEIP--LPSL-----IVIGYDVCHDPR--FKEKSYGAFVATLDKNLTQYYSAVNAHT 439
++ +P P + I +G D+ H ++ S A V ++D + ++Y + V
Sbjct: 624 N-SILLPNVRPRIFNEPVIFLGCDITHPAAGDTRKPSIAAVVGSMDAHPSRYAATVRVQQ 682
Query: 440 SGEELSGHMGFNIVCALKKFRERNGNLPTRIFIYRDG 550
+E+ + + + L +F P RI +YRDG
Sbjct: 683 HRQEIITDLTYMVRELLVQFYRNTRFKPARIVVYRDG 719
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 631 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 684
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 685 CVLMKNV-SRPTPATCANIILKLNMKMGGINSRIVADQITNKYLVDQPTMVVGIDVTHPT 743
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 744 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 803
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 804 PARIIVYRDG 813
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 628 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 681
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 682 CVLMKNV-SRPTPATCANIILKLNMKMGGINSRIVADQITNKYLVDQPTMVVGIDVTHPT 740
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 741 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 800
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 801 PARIIVYRDG 810
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 631 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 684
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 685 CVLMKNV-SRPTPATCANIILKLNMKMGGINSRIVADQITNKYLVDQPTMVVGIDVTHPT 743
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 744 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 803
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 804 PARIIVYRDG 813
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 628 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 681
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 682 CVLMKNV-SRPTPATCANIILKLNMKMGGINSRIVADQITNKYLVDQPTMVVGIDVTHPT 740
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 741 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 800
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 801 PARIIVYRDG 810
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 633 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 686
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 687 CVLMKNV-SRPTPATCANIVLKLNMKMGGINSRIVADKITNKYLVDQPTMVVGIDVTHPT 745
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 746 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 805
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 806 PARIIVYRDG 815
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 636 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 689
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 690 CVLMKNV-SRPTPATCANIVLKLNMKMGGINSRIVADKITNKYLVDQPTMVVGIDVTHPT 748
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 749 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 808
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 809 PARIIVYRDG 818
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 633 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 686
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 687 CVLMKNV-SRPTPATCANIVLKLNMKMGGINSRIVADKITNKYLVDQPTMVVGIDVTHPT 745
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 746 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 805
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 806 PARIIVYRDG 815
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 43.2 bits (97), Expect = 1e-04
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILCVLARNSPDRYESIKKKCTVDRAVPTQ 196
SK ++ T+ + A EY + I+ VL + D Y ++K++ + + +Q
Sbjct: 636 SKEDVCTLFTEIADEY------RVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 689
Query: 197 VVCARNMTSKSAMSIATKVAIQMNCKLGGAPWTV---EIPLPSLI-----VIGYDVCH-- 346
V +N+ S+ + + +++N K+GG + +I L+ V+G DV H
Sbjct: 690 CVLMKNV-SRPTPATCANIVLKLNMKMGGINSRIVADKITNKYLVDQPTMVVGIDVTHPT 748
Query: 347 --DPRFKEKSYGAFVATLDKNLTQYYSAVNAHTSGEELSGHMGFNIVCALKKFRERNGNL 520
+ R S A VA +D Y + V E ++ I + F
Sbjct: 749 QAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLLDAIRERIITFYRHTKQK 808
Query: 521 PTRIFIYRDG 550
P RI +YRDG
Sbjct: 809 PARIIVYRDG 818
>AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical
protein Y49F6A.1 protein.
Length = 966
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 461 HMGFNIVCALKKFRERNGNLPTRIFIYRDG 550
++G +I L+ ++E +G+LP +I IYR G
Sbjct: 734 NLGTHIPKCLQYYKESSGSLPEKIVIYRTG 763
>U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protease
related protein 4 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 389 TLDKNLTQYYSAVNAHTSGEELSGH 463
T+ ++ QY + V HT+G+EL GH
Sbjct: 257 TVYEDFYQYKTGVYVHTTGQELGGH 281
>L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 389 TLDKNLTQYYSAVNAHTSGEELSGH 463
T+ ++ QY + V HT+G+EL GH
Sbjct: 257 TVYEDFYQYKTGVYVHTTGQELGGH 281
>L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 389 TLDKNLTQYYSAVNAHTSGEELSGH 463
T+ ++ QY + V HT+G+EL GH
Sbjct: 257 TVYEDFYQYKTGVYVHTTGQELGGH 281
>AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical
protein Y59A8A.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 SKPEIVTIRMDSATEYGNMCEATIAKRNPAMILC-VLARNSPDRYESIKKKCTVDRAVPT 193
S+P+++ + + C + P ++L ++RN + +E I++KC + P
Sbjct: 391 SEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKIRQKCVLQYLQPY 450
Query: 194 QVVCARNMTSKSAMSIA 244
+ M MS A
Sbjct: 451 STIKMATMAEAVGMSSA 467
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 192 VGTARSTVHFFLIDSYLSGEFLASTHKIMAGFLLAIVASHILPYSVA 52
+ A T+ FF+ + +G FL AG LL HI+P+S++
Sbjct: 94 ISLAPCTLLFFIPAQHANGPFLKILLAFGAGGLLGDALLHIIPHSLS 140
>Z92786-8|CAB07210.1| 325|Caenorhabditis elegans Hypothetical
protein F47H4.11 protein.
Length = 325
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 263 MNCKLGGAPWTVEIPLPSLIVIGYD 337
+N KL W + + +PSL +GYD
Sbjct: 296 VNGKLSSKKWRLNLKIPSLNFLGYD 320
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 27.1 bits (57), Expect = 9.0
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 281 GAPWTVEI-PLPSLIVIGYDVCHDPRFKE-KSYGAFVATLDKNLTQYYSAVNAHTSGEEL 454
G +T+ I PLP++ + ++V H+ K +G A N +Y V A ++GE
Sbjct: 63 GKVYTLWIGPLPTVFIADFEVAHETHVKRAHEFGTRYAPGLMNYNRYERGVVA-SNGEFF 121
Query: 455 SGHMGFNIVCALKKFRERNGNLPTRI 532
H F ++ + F + RI
Sbjct: 122 QEHSRF-VLSTFRNFASGRNIMEERI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,309
Number of Sequences: 27780
Number of extensions: 276629
Number of successful extensions: 700
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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