Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_H15
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 260 5e-70
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 258 2e-69
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 258 2e-69
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 258 2e-69
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 258 2e-69
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 258 2e-69
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 258 2e-69
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 258 2e-69
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 248 3e-66
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 219 9e-58
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 2e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 7e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 7e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 1e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 165 2e-41
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 142 2e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 111 3e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 3e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 62 4e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 1e-05
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 35 0.047
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.58
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.77
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.77
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 0.77
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 31 0.77
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 1.0
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 30 1.3
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 5.4
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 5.4
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 28 5.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 28 5.4
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 27 7.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 7.2
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 27 9.5
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 27 9.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 260 bits (637), Expect = 5e-70
Identities = 117/119 (98%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 110 bits (264), Expect = 8e-25
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 258 bits (633), Expect = 2e-69
Identities = 116/119 (97%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 258 bits (633), Expect = 2e-69
Identities = 116/119 (97%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 258 bits (633), Expect = 2e-69
Identities = 116/119 (97%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 258 bits (633), Expect = 2e-69
Identities = 116/119 (97%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 258 bits (633), Expect = 2e-69
Identities = 115/119 (96%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 110 bits (264), Expect = 8e-25
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 258 bits (633), Expect = 2e-69
Identities = 116/119 (97%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 258 bits (633), Expect = 2e-69
Identities = 116/119 (97%), Positives = 118/119 (99%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 248 bits (606), Expect = 3e-66
Identities = 109/117 (93%), Positives = 116/117 (99%)
Frame = +3
Query: 66 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 245
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 246 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NR K
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
Score = 106 bits (255), Expect = 1e-23
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYA
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYA 170
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 219 bits (536), Expect = 9e-58
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +3
Query: 114 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 293
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 294 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRAK 416
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR K
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 157
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 188 bits (458), Expect = 2e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKI 317
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 7e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKI 317
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 7e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDMEKI 317
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 182 bits (444), Expect = 1e-46
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGILTLKYPIEHGIITNWDDM 308
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 165 bits (401), Expect = 2e-41
Identities = 73/75 (97%), Positives = 74/75 (98%)
Frame = +3
Query: 192 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 371
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 372 LLTEAPLNPKANRAK 416
LLTEAPLNPKANR K
Sbjct: 61 LLTEAPLNPKANREK 75
Score = 109 bits (263), Expect = 1e-24
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYA
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 127
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 142 bits (343), Expect = 2e-34
Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Frame = +3
Query: 66 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 236
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 237 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRA 413
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NR
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 414 KDDPDHV*NFQLP 452
+ F +P
Sbjct: 122 RSAEIFFETFNVP 134
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
++ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A
Sbjct: 121 ERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFA 174
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 111 bits (267), Expect = 3e-25
Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 257
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 258 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRAK 416
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NR K
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREK 122
Score = 77.0 bits (181), Expect = 9e-15
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+KM Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+A
Sbjct: 121 EKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFA 174
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 3e-19
Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 203
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 204 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 380
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 381 EAPLNPKANRAKDDPDHV*NFQLPG 455
E PLN NR +F +PG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPG 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Frame = +1
Query: 424 QIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGY 570
+IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY
Sbjct: 135 EIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGY 191
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 412 QKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 573
+K+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA
Sbjct: 140 EKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYA 193
Score = 60.1 bits (139), Expect = 1e-09
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Frame = +3
Query: 69 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 242
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 243 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 377
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 378 TEAPLNPKANRAKDDPDHV*NFQLPGY 458
+E+ N +A R K FQ+P Y
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAY 155
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 75 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 254
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 255 LTLKYPIEHGIITNWDDMEKIWHHTF 332
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 75 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 254
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 255 LTLKYPIEHGIITNWDDMEKIWHHTF 332
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 415 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 570
++ QI E + + Q L LYA TTG+V+D G+ V + VP+ +GY
Sbjct: 291 ELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGY 341
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 539 TPSPESSTIPVVRPEAYRESTAWMATYIAGEL 444
TP P SST+PVV P + T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 205 PMPTMTPWWRGRPTMDGKTARGASSPAKPALHMPEPL 95
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 461 TSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCPSTKVT 571
T+P P SP T P V PV+ T T + T +T T
Sbjct: 664 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 461 TSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCPSTKVT 571
T+P P SP T P V PV+ T T + T +T T
Sbjct: 720 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 756
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 461 TSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCPSTKVT 571
T+P P SP T P V PV+ T T + T +T T
Sbjct: 543 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 461 TSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCPSTKVT 571
TSP P PP + P + T T + PCP T
Sbjct: 122 TSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPAT 158
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 167 GSPSPPGCHGRHGTEGLLRR**GPEQER-YPHPEVP 271
G P P G G HGTEG + GPE + YP P P
Sbjct: 510 GPPGPMGLRGPHGTEGETGK-QGPEGSKGYPGPMGP 544
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 188 TLVARATHDGREDGARRVVTGETGFAHAGA 99
T+V R T DGRE +RVV+ FAH A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3
Query: 188 TLVARATHDGREDGARRVVTGETGFAHAGA 99
T+V R T DGRE +RVV+ FAH A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 167 GSPSPPGCHGRHGTEGL 217
G P PPGC G G GL
Sbjct: 112 GPPGPPGCRGEPGPSGL 128
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 428 SCLKLSTPRLCTSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCP 556
SC P+ C +P PC T P P+ C + P P
Sbjct: 635 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 677
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 428 SCLKLSTPRLCTSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCP 556
SC P+ C +P PC T P P+ C + P P
Sbjct: 280 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 322
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 428 SCLKLSTPRLCTSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCP 556
SC P+ C +P PC T P P+ C + P P
Sbjct: 232 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 274
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 428 SCLKLSTPRLCTSPSRPCSPYTPPVVRPVSCWTLVTVSLTPCP 556
SC P+ C +P PC T P P+ C + P P
Sbjct: 960 SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 1002
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 467 PSRPCSPYTPPVVRP 511
P++PC P TPP RP
Sbjct: 122 PAQPCDPITPPPCRP 136
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/75 (22%), Positives = 28/75 (37%)
Frame = +3
Query: 42 TKTHAKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 221
+K H D L++ +C GF G A + + G HQ + + +
Sbjct: 495 SKRHGMFVVDSSLRLIIKIVFSICSIGFTGYFAYKYFYERPSGLQSHQWICTPLSSQQKV 554
Query: 222 VGDEAQSKRGILTLK 266
+ D+ KR L K
Sbjct: 555 LEDDKNVKRRPLNSK 569
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 114 KAGFAGDDAPRAVFPSIVGRPRHQG 188
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +2
Query: 410 GKR*PRSCLKLSTPRLCT-----SPSRPCSPYTPPVVR-PVSCWTLVTVSLTPCPSTKVT 571
G+R P + +TP+L T SP R ++ P + +T +V +TP PS T
Sbjct: 533 GQRRPSTSDHTTTPQLRTTAAPLSPGRLSEQQNEDLIPLPTAAYTFGSVDVTPSPSISTT 592
Query: 572 P 574
P
Sbjct: 593 P 593
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 431 CLKLSTPRLCTSPSRP--CSPYTPPVVRPVSCWTLVTVSLTPCPSTKV 568
C+++ L S S+ CS + P + + C T V +L+PC T++
Sbjct: 1697 CMEVVNVTLGCSHSQDVVCSSFMPGMTDHIECLTKVPKTLSPCKHTEL 1744
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 467 PSRPCSPYTPPVVRP 511
P++PC P TPP RP
Sbjct: 143 PAQPCHPITPPPCRP 157
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 167 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYH 289
G P PG HGRHG+ R G R+ P P R +H
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHG-HGGRHGPPHCPGRHGHH 397
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 167 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 274
G PS PG G HGT G L +Q++ H +PH
Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 167 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 274
G PS PG G HGT G L +Q++ H +PH
Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 167 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHP 262
GS PG HGR G G+ + P YP P
Sbjct: 193 GSKGAPGTHGRQGMPGVRYQLGEPGPAGYPGP 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,484,081
Number of Sequences: 27780
Number of extensions: 293821
Number of successful extensions: 1771
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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