Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H13
         (453 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M32405-1|AAA36568.1|  145|Homo sapiens protein ( Human homologue...   217   2e-56
J02984-1|AAA36036.1|  145|Homo sapiens protein ( Human insulinom...   217   2e-56
BC141832-1|AAI41833.1|  145|Homo sapiens ribosomal protein S15 p...   217   2e-56
BC105810-1|AAI05811.1|  145|Homo sapiens ribosomal protein S15 p...   217   2e-56
BC064908-1|AAH64908.1|  145|Homo sapiens ribosomal protein S15 p...   217   2e-56
AF145025-1|AAP97277.1|  145|Homo sapiens insulinoma protein prot...   217   2e-56
BX641085-1|CAE46040.1| 2422|Homo sapiens hypothetical protein pr...    29   9.8  
AF191633-1|AAF72339.1| 2602|Homo sapiens filamin protein.              29   9.8  
AF043045-1|AAC33845.1| 2602|Homo sapiens actin-binding protein h...    29   9.8  
AF042166-1|AAC39842.1| 2602|Homo sapiens beta-filamin protein.         29   9.8  
AB209889-1|BAD93126.1| 1613|Homo sapiens filamin B, beta (actin ...    29   9.8  
AB191258-1|BAD52434.1| 2591|Homo sapiens filamin B protein.            29   9.8  

>M32405-1|AAA36568.1|  145|Homo sapiens protein ( Human homologue of
           rat insulinoma gene (rig), exons 1-4. ).
          Length = 145

 Score =  217 bits (529), Expect = 2e-56
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 10  FRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIV 189
           +RGVDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+V
Sbjct: 17  YRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVV 76

Query: 190 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 369
           KTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGAT
Sbjct: 77  KTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136

Query: 370 HSSRFIPLK 396
           HSSRFIPLK
Sbjct: 137 HSSRFIPLK 145


>J02984-1|AAA36036.1|  145|Homo sapiens protein ( Human insulinoma
           rig-analog mRNA encoding DNA-binding protein, complete
           cds. ).
          Length = 145

 Score =  217 bits (529), Expect = 2e-56
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 10  FRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIV 189
           +RGVDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+V
Sbjct: 17  YRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVV 76

Query: 190 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 369
           KTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGAT
Sbjct: 77  KTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136

Query: 370 HSSRFIPLK 396
           HSSRFIPLK
Sbjct: 137 HSSRFIPLK 145


>BC141832-1|AAI41833.1|  145|Homo sapiens ribosomal protein S15
           protein.
          Length = 145

 Score =  217 bits (529), Expect = 2e-56
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 10  FRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIV 189
           +RGVDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+V
Sbjct: 17  YRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVV 76

Query: 190 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 369
           KTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGAT
Sbjct: 77  KTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136

Query: 370 HSSRFIPLK 396
           HSSRFIPLK
Sbjct: 137 HSSRFIPLK 145


>BC105810-1|AAI05811.1|  145|Homo sapiens ribosomal protein S15
           protein.
          Length = 145

 Score =  217 bits (529), Expect = 2e-56
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 10  FRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIV 189
           +RGVDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+V
Sbjct: 17  YRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVV 76

Query: 190 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 369
           KTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGAT
Sbjct: 77  KTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136

Query: 370 HSSRFIPLK 396
           HSSRFIPLK
Sbjct: 137 HSSRFIPLK 145


>BC064908-1|AAH64908.1|  145|Homo sapiens ribosomal protein S15
           protein.
          Length = 145

 Score =  217 bits (529), Expect = 2e-56
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 10  FRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIV 189
           +RGVDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+V
Sbjct: 17  YRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVV 76

Query: 190 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 369
           KTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGAT
Sbjct: 77  KTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136

Query: 370 HSSRFIPLK 396
           HSSRFIPLK
Sbjct: 137 HSSRFIPLK 145


>AF145025-1|AAP97277.1|  145|Homo sapiens insulinoma protein
           protein.
          Length = 145

 Score =  217 bits (529), Expect = 2e-56
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 10  FRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIV 189
           +RGVDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+V
Sbjct: 17  YRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVV 76

Query: 190 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGAT 369
           KTHLR+MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGAT
Sbjct: 77  KTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGAT 136

Query: 370 HSSRFIPLK 396
           HSSRFIPLK
Sbjct: 137 HSSRFIPLK 145


>BX641085-1|CAE46040.1| 2422|Homo sapiens hypothetical protein
            protein.
          Length = 2422

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 310  GEFSVTYKPVKHGRPGIGATHSSRFIPL 393
            G ++VTY P K GR  IG T+    IPL
Sbjct: 1405 GTYAVTYIPDKTGRYMIGVTYGGDDIPL 1432


>AF191633-1|AAF72339.1| 2602|Homo sapiens filamin protein.
          Length = 2602

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 310  GEFSVTYKPVKHGRPGIGATHSSRFIPL 393
            G ++VTY P K GR  IG T+    IPL
Sbjct: 1574 GTYAVTYIPDKTGRYMIGVTYGGDDIPL 1601


>AF043045-1|AAC33845.1| 2602|Homo sapiens actin-binding protein
            homolog ABP-278 protein.
          Length = 2602

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 310  GEFSVTYKPVKHGRPGIGATHSSRFIPL 393
            G ++VTY P K GR  IG T+    IPL
Sbjct: 1574 GTYAVTYIPDKTGRYMIGVTYGGDDIPL 1601


>AF042166-1|AAC39842.1| 2602|Homo sapiens beta-filamin protein.
          Length = 2602

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 310  GEFSVTYKPVKHGRPGIGATHSSRFIPL 393
            G ++VTY P K GR  IG T+    IPL
Sbjct: 1574 GTYAVTYIPDKTGRYMIGVTYGGDDIPL 1601


>AB209889-1|BAD93126.1| 1613|Homo sapiens filamin B, beta (actin
           binding protein 278) variant protein.
          Length = 1613

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 310 GEFSVTYKPVKHGRPGIGATHSSRFIPL 393
           G ++VTY P K GR  IG T+    IPL
Sbjct: 585 GTYAVTYIPDKTGRYMIGVTYGGDDIPL 612


>AB191258-1|BAD52434.1| 2591|Homo sapiens filamin B protein.
          Length = 2591

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 310  GEFSVTYKPVKHGRPGIGATHSSRFIPL 393
            G ++VTY P K GR  IG T+    IPL
Sbjct: 1574 GTYAVTYIPDKTGRYMIGVTYGGDDIPL 1601


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,260,996
Number of Sequences: 237096
Number of extensions: 1507779
Number of successful extensions: 2615
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2615
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)