Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H12
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   3.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   4.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   4.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   5.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.6  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 395 PLKVFPQPGYVNVIAHCQTLVIAC 324
           PL   P+P     + H Q   +AC
Sbjct: 369 PLSAIPEPSKNPAMGHWQMSCVAC 392


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 181 SAQTLFKQSTSFCVSYSPRRTEYIV 107
           +A   F++ TS    Y PR T+Y +
Sbjct: 215 NADDSFQRLTSSTFVYDPRYTKYTI 239


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 154 TSFCVSYSPRRTEYI 110
           T  CV Y PRR E++
Sbjct: 717 TDPCVRYYPRRKEWL 731


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 99  EVGTIYSVRLGEYDTQND 152
           E+ TIYS  + EY+  ND
Sbjct: 17  EIKTIYSWNVIEYNFPND 34


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 334 LLLVXHIGCT*YVYFAR 284
           LLL+  +GCT   +FAR
Sbjct: 3   LLLLIVLGCTRSAHFAR 19


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 76  HVPLSAHIWDYTSATL 29
           + P   +IWDYT ++L
Sbjct: 407 NAPEVENIWDYTPSSL 422


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 52  RYVLTAAH 75
           RYVLTAAH
Sbjct: 196 RYVLTAAH 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,087
Number of Sequences: 438
Number of extensions: 2517
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)