Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H10
         (279 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           25   0.17 
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           25   0.17 

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 25.0 bits (52), Expect = 0.17
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 169 LASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDE 276
           L  +S++D   +++    E  K  +QN  A++ KDE
Sbjct: 8   LGISSSDDNRIDQATGLTERQKKLVQNTWAVVRKDE 43


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 25.0 bits (52), Expect = 0.17
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 169 LASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDE 276
           L  +S++D   +++    E  K  +QN  A++ KDE
Sbjct: 8   LGISSSDDNRIDQATGLTERQKKLVQNTWAVVRKDE 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,771
Number of Sequences: 438
Number of extensions: 1196
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)