Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H07
         (394 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-138|AAF51469.2|  826|Drosophila melanogaster CG2839-PA ...    29   2.2  
BT016069-1|AAV36954.1|  604|Drosophila melanogaster LP07514p pro...    27   8.9  
AE014298-1510|AAF47962.2|  604|Drosophila melanogaster CG32669-P...    27   8.9  

>AE014134-138|AAF51469.2|  826|Drosophila melanogaster CG2839-PA
           protein.
          Length = 826

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +1

Query: 190 YFLFYFFS*GWCNVF 234
           YFLF FFS G CNVF
Sbjct: 7   YFLFVFFSYGSCNVF 21


>BT016069-1|AAV36954.1|  604|Drosophila melanogaster LP07514p
           protein.
          Length = 604

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 3   TRVLCECVLKKGVTVKNETQVSNLMALVKMNEVSAKELLVCPIIAITILESTIS 164
           T++L  C     +   N+TQV  LMA+  ++   A      PI+ +  L +  S
Sbjct: 238 TQILGGCATYLAIYGVNQTQVQRLMAVKSLSAARAALWWCLPILCLLSLSTCFS 291


>AE014298-1510|AAF47962.2|  604|Drosophila melanogaster CG32669-PA
           protein.
          Length = 604

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 3   TRVLCECVLKKGVTVKNETQVSNLMALVKMNEVSAKELLVCPIIAITILESTIS 164
           T++L  C     +   N+TQV  LMA+  ++   A      PI+ +  L +  S
Sbjct: 238 TQILGGCATYLAIYGVNQTQVQRLMAVKSLSAARAALWWCLPILCLLSLSTCFS 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,757,371
Number of Sequences: 53049
Number of extensions: 241200
Number of successful extensions: 573
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)