Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H05
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898804-1|AAX51890.1|  388|Homo sapiens XL protein.                   30   5.0  
AL132655-7|CAM28315.1|  720|Homo sapiens GNAS complex locus prot...    30   5.0  
AL132655-6|CAI43073.2| 1037|Homo sapiens GNAS complex locus prot...    30   5.0  
AL132655-5|CAI43074.2| 1023|Homo sapiens GNAS complex locus prot...    30   5.0  
AL121917-8|CAI42566.2| 1037|Homo sapiens GNAS complex locus prot...    30   5.0  
AL121917-7|CAI42567.2| 1023|Homo sapiens GNAS complex locus prot...    30   5.0  
AL109840-9|CAI42932.2| 1037|Homo sapiens GNAS complex locus prot...    30   5.0  
AL109840-8|CAI42933.2| 1023|Homo sapiens GNAS complex locus prot...    30   5.0  
AJ251760-2|CAB83215.1|  388|Homo sapiens XLalphas protein protein.     30   5.0  
AJ224868-1|CAA12165.1|  441|Homo sapiens GNAS1 protein.                30   5.0  

>AY898804-1|AAX51890.1|  388|Homo sapiens XL protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 175 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 209


>AL132655-7|CAM28315.1|  720|Homo sapiens GNAS complex locus
           protein.
          Length = 720

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AL132655-6|CAI43073.2| 1037|Homo sapiens GNAS complex locus
           protein.
          Length = 1037

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AL132655-5|CAI43074.2| 1023|Homo sapiens GNAS complex locus
           protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AL121917-8|CAI42566.2| 1037|Homo sapiens GNAS complex locus
           protein.
          Length = 1037

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AL121917-7|CAI42567.2| 1023|Homo sapiens GNAS complex locus
           protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AL109840-9|CAI42932.2| 1037|Homo sapiens GNAS complex locus
           protein.
          Length = 1037

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AL109840-8|CAI42933.2| 1023|Homo sapiens GNAS complex locus
           protein.
          Length = 1023

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 476 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 510


>AJ251760-2|CAB83215.1|  388|Homo sapiens XLalphas protein protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 175 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 209


>AJ224868-1|CAA12165.1|  441|Homo sapiens GNAS1 protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 25  SPAVAPLHIGHVAPIAPLATAPIYGALSTASIAKV 129
           +PA A     HVAP AP A AP   A S    A+V
Sbjct: 175 APAAAETRAAHVAPAAPDAGAPTAPAASATRAAQV 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,796,471
Number of Sequences: 237096
Number of extensions: 991321
Number of successful extensions: 1986
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)