Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_H01
         (200 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-P...    28   2.1  
AF324750-1|AAN75749.1|  563|Drosophila melanogaster N-acetylgala...    26   8.3  
AE014296-2565|AAS64999.1|  563|Drosophila melanogaster CG7304-PB...    26   8.3  
AE014296-2564|AAF49589.2|  635|Drosophila melanogaster CG7304-PA...    26   8.3  

>AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-PA
            protein.
          Length = 1698

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -1

Query: 170  ILSIMNRFKFCPSIATVSVMDLSYNRYR*LFKKNECYL--IDKFDTSEK 30
            I+++ N FKF PSI +++ +  S N     F+ ++ Y   + K +  EK
Sbjct: 1142 IVAVQNMFKFFPSIKSITELSQSSNMRFMQFRAHDKYALHLSKMEKREK 1190


>AF324750-1|AAN75749.1|  563|Drosophila melanogaster
           N-acetylgalactosaminyltransferase protein.
          Length = 563

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 149 FKFCPSIATVSVMDLSYNRYR*LFKKNECYLIDKF 45
           +K+ P +  +S  DL  N  R L+K+NEC    +F
Sbjct: 381 YKYQPHLLNISEGDL--NEPRKLYKQNECQSFKEF 413


>AE014296-2565|AAS64999.1|  563|Drosophila melanogaster CG7304-PB,
           isoform B protein.
          Length = 563

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 149 FKFCPSIATVSVMDLSYNRYR*LFKKNECYLIDKF 45
           +K+ P +  +S  DL  N  R L+K+NEC    +F
Sbjct: 381 YKYQPHLLNISEGDL--NEPRKLYKQNECQSFKEF 413


>AE014296-2564|AAF49589.2|  635|Drosophila melanogaster CG7304-PA,
           isoform A protein.
          Length = 635

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 149 FKFCPSIATVSVMDLSYNRYR*LFKKNECYLIDKF 45
           +K+ P +  +S  DL  N  R L+K+NEC    +F
Sbjct: 453 YKYQPHLLNISEGDL--NEPRKLYKQNECQSFKEF 485


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,093,737
Number of Sequences: 53049
Number of extensions: 132426
Number of successful extensions: 369
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 24,988,368
effective HSP length: 46
effective length of database: 22,548,114
effective search space used: 450962280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)