Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_G23
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 73 2e-13
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 73 2e-13
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 29 2.5
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 29 2.5
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 29 2.5
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 29 2.5
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 29 2.5
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 29 2.5
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 29 2.5
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 29 2.5
AL032627-18|CAB63359.2| 267|Caenorhabditis elegans Hypothetical... 28 4.4
AF076843-1|AAC95525.1| 267|Caenorhabditis elegans Rad1-like pro... 28 4.4
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like receptor
TOL-1 protein.
Length = 1221
Score = 72.9 bits (171), Expect = 2e-13
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Frame = +1
Query: 190 YDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGY------VTEKIRQAVQTS 351
Y AF+ YS KDE V D+L LE D Y+LCL +RD Y +++++ + +S
Sbjct: 1056 YHAFVSYSKKDEKMVIDQLCRPLE--DEDYQLCLLHRDGPTYCSNLHAISDELIAQMDSS 1113
Query: 352 RRTIMVLSENFLRSEWIRCELKSALHQVLTDRRKRLIVVLLRQVPQRDLDQDIRLYLKTN 531
+ I+VL+++FL +EW ++K++ +R KR+I VL V LD ++ L+ +
Sbjct: 1114 QCLILVLTKHFLENEWKTLQIKTSHQLFAKNRAKRVIAVLGDGVDANLLDDELGQILRKH 1173
Query: 532 KCLYADDRLSWEKLQFALP 588
+ L W L +LP
Sbjct: 1174 TRIEMRSHLFWTLLHSSLP 1192
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosophila)
family protein 1 protein.
Length = 1221
Score = 72.9 bits (171), Expect = 2e-13
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Frame = +1
Query: 190 YDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGY------VTEKIRQAVQTS 351
Y AF+ YS KDE V D+L LE D Y+LCL +RD Y +++++ + +S
Sbjct: 1056 YHAFVSYSKKDEKMVIDQLCRPLE--DEDYQLCLLHRDGPTYCSNLHAISDELIAQMDSS 1113
Query: 352 RRTIMVLSENFLRSEWIRCELKSALHQVLTDRRKRLIVVLLRQVPQRDLDQDIRLYLKTN 531
+ I+VL+++FL +EW ++K++ +R KR+I VL V LD ++ L+ +
Sbjct: 1114 QCLILVLTKHFLENEWKTLQIKTSHQLFAKNRAKRVIAVLGDGVDANLLDDELGQILRKH 1173
Query: 532 KCLYADDRLSWEKLQFALP 588
+ L W L +LP
Sbjct: 1174 TRIEMRSHLFWTLLHSSLP 1192
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = +1
Query: 178 SEKMYDA-FICYSSKDETWVTDELAPTLEHGDPSYKLCLYY--------RDVGGYVTEKI 330
++K Y+ F ++ +++TD L P L S ++C +Y +D G +T +
Sbjct: 57 ADKFYEVIFRKIATTSLSFMTDSLEPKLAASGDSLEICKFYALFLEYMRKDHSGMLTRAL 116
Query: 331 RQAVQTSRRTIMVLSENFL 387
QA +R VL + FL
Sbjct: 117 EQASSENRVDTAVLLDMFL 135
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 175 DSEKMYDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQAVQTSR 354
D E ++ + + + +E + + L+H P+ + + +DV YVT K+ S
Sbjct: 64 DDEDVHISIVLAVAVEEKEIEEHWNHVLQHFVPAIEPLQFEKDVRRYVTTKVESLANNSE 123
Query: 355 RTIMVLSE 378
+ SE
Sbjct: 124 EVVSPYSE 131
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 175 DSEKMYDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQAVQTSR 354
D E ++ + + + +E + + L+H P+ + + +DV YVT K+ S
Sbjct: 64 DDEDVHISIVLAVAVEEKEIEEHWNHVLQHFVPAIEPLQFEKDVRRYVTTKVESLANNSE 123
Query: 355 RTIMVLSE 378
+ SE
Sbjct: 124 EVVSPYSE 131
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 175 DSEKMYDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQAVQTSR 354
D E ++ + + + +E + + L+H P+ + + +DV YVT K+ S
Sbjct: 64 DDEDVHISIVLAVAVEEKEIEEHWNHVLQHFVPAIEPLQFEKDVRRYVTTKVESLANNSE 123
Query: 355 RTIMVLSE 378
+ SE
Sbjct: 124 EVVSPYSE 131
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 175 DSEKMYDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQAVQTSR 354
D E ++ + + + +E + + L+H P+ + + +DV YVT K+ S
Sbjct: 64 DDEDVHISIVLAVAVEEKEIEEHWNHVLQHFVPAIEPLQFEKDVRRYVTTKVESLANNSE 123
Query: 355 RTIMVLSE 378
+ SE
Sbjct: 124 EVVSPYSE 131
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 175 DSEKMYDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQAVQTSR 354
D E ++ + + + +E + + L+H P+ + + +DV YVT K+ S
Sbjct: 64 DDEDVHISIVLAVAVEEKEIEEHWNHVLQHFVPAIEPLQFEKDVRRYVTTKVESLANNSE 123
Query: 355 RTIMVLSE 378
+ SE
Sbjct: 124 EVVSPYSE 131
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +1
Query: 175 DSEKMYDAFICYSSKDETWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQAVQTSR 354
D E ++ + + + +E + + L+H P+ + + +DV YVT K+ S
Sbjct: 64 DDEDVHISIVLAVAVEEKEIEEHWNHVLQHFVPAIEPLQFEKDVRRYVTTKVESLANNSE 123
Query: 355 RTIMVLSE 378
+ SE
Sbjct: 124 EVVSPYSE 131
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Frame = +1
Query: 178 SEKMYDA-FICYSSKDETWVTDELAPTLEHGDPSYKLCLYY--------RDVGGYVTEKI 330
++K Y+ F ++ +++TD L P L S ++C +Y +D G +T +
Sbjct: 57 ADKFYEVIFRKIATTSLSFMTDSLEPKLAASGDSLEICKFYALFLEYMRKDHSGMLTRAL 116
Query: 331 RQAVQTSRRTIMVLSENFL 387
QA +R VL + FL
Sbjct: 117 EQASSENRVDTAVLLDMFL 135
>AL032627-18|CAB63359.2| 267|Caenorhabditis elegans Hypothetical
protein Y41C4A.14 protein.
Length = 267
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 160 DVDREDSEKMYDAFICYSSKDE-TWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQ 336
++ +E+ +++ F + KD TW E + D SY+L + + + + K+R+
Sbjct: 13 ELKKENVKELAQVFKTVAFKDTGTWHASEAGMKITVDDGSYQLASVFINPAFFSSFKVRE 72
Query: 337 AVQTSRRTIMVLSENFLRSE 396
+ + + +I +SE SE
Sbjct: 73 EIVSMKISIKSISEFLSISE 92
>AF076843-1|AAC95525.1| 267|Caenorhabditis elegans Rad1-like
protein protein.
Length = 267
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/80 (22%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 160 DVDREDSEKMYDAFICYSSKDE-TWVTDELAPTLEHGDPSYKLCLYYRDVGGYVTEKIRQ 336
++ +E+ +++ F + KD TW E + D SY+L + + + + K+R+
Sbjct: 13 ELKKENVKELAQVFKTVAFKDTGTWHASEAGMKITVDDGSYQLASVFINPAFFSSFKVRE 72
Query: 337 AVQTSRRTIMVLSENFLRSE 396
+ + + +I +SE SE
Sbjct: 73 EIVSMKISIKSISEFLSISE 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,462,496
Number of Sequences: 27780
Number of extensions: 247092
Number of successful extensions: 529
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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