Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_G16
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 246 8e-66
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 246 1e-65
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 245 2e-65
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 130 9e-31
07_03_1357 - 25982861-25983068,25983354-25983361 61 6e-10
07_03_1358 - 25984897-25984997,25985623-25985650 47 1e-05
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 32 0.32
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 29 3.0
02_05_1008 - 33461225-33462334 29 3.0
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 4.0
10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022 28 5.2
05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16... 28 5.2
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 5.2
02_04_0333 + 22096960-22097445,22098508-22098643,22099159-220993... 28 6.9
02_01_0104 - 767490-767627,768025-768158,768971-769229,769315-76... 28 6.9
01_05_0433 - 22094784-22095659 28 6.9
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 9.2
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 246 bits (603), Expect = 8e-66
Identities = 116/181 (64%), Positives = 140/181 (77%)
Frame = +1
Query: 82 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 261
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 262 KRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 441
+R+FEG A + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 129
Query: 442 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGATN 621
LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRV RKN +K GG
Sbjct: 130 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDG 189
Query: 622 D 624
+
Sbjct: 190 E 190
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 246 bits (602), Expect = 1e-65
Identities = 116/177 (65%), Positives = 139/177 (78%)
Frame = +1
Query: 82 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 261
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 262 KRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 441
+R+FEG A + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARV 345
Query: 442 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGG 612
LIRQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRV RKN +K GG
Sbjct: 346 LIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 402
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 245 bits (600), Expect = 2e-65
Identities = 116/179 (64%), Positives = 139/179 (77%)
Frame = +1
Query: 88 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 267
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 268 LFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILI 447
+FEG A + Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LI
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLI 154
Query: 448 RQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGATND 624
RQRHIRV +Q+VNIPSF+VR++S KHIDFSL SPFGGG PGRV RKN +K GG +
Sbjct: 155 RQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGE 213
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 130 bits (314), Expect = 9e-31
Identities = 68/127 (53%), Positives = 83/127 (65%)
Frame = +1
Query: 82 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 261
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 262 KRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 441
+R+FEG A E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
Query: 442 LIRQRHI 462
LIRQ HI
Sbjct: 119 LIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 463 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGG 612
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RV RKN + GG
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKNQKASGGGG 52
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 82 FSKTYVTPRRPFEKARLDQELKIIGEYG 165
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 379 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 504
RRL T + K A+ + A I+Q H+RV + V P+F+V
Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/65 (26%), Positives = 23/65 (35%)
Frame = +3
Query: 408 WSCEVNPSCPHLDQTEAYSCPQAGGEHSFVHRPPGLRQAH*LLSEVAVRRRPARSRHEEE 587
W P P L + SC S RPPG R +S V R + + +
Sbjct: 4 WLIRPKPISPPLSAAKTPSCSCQANSSSSALRPPGARADSVSVSPVHARGGESAAAMDSR 63
Query: 588 PAQGP 602
P + P
Sbjct: 64 PREAP 68
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +1
Query: 322 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 501
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 502 VRLDSGKHIDFSLKSPFGGGR 564
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 361 IEDFLERRLQTQVFKAGLAKSIHHAR 438
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022
Length = 587
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 393 SGVQGWSCEVNPSCPHLDQTEAY 461
+GV WS VNPS +L TEA+
Sbjct: 107 AGVSTWSLRVNPSSGNLHPTEAH 129
>05_01_0024 -
164618-165139,166884-166949,167046-167216,167321-167422,
167538-167600,167679-167825,168234-168359,168742-168921,
169183-169322,169688-169861,170096-170123
Length = 572
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 614 APPTWPLR-RFFLVTRPGRPPPNGDFRE 534
APP WPL+ +L P PPP F E
Sbjct: 449 APPGWPLQPPMYLPVTPAPPPPPPAFSE 476
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 136 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>02_04_0333 +
22096960-22097445,22098508-22098643,22099159-22099325,
22099447-22099567,22099660-22099760,22099908-22100006,
22100512-22100622,22100709-22100788,22100880-22100949,
22101880-22101965,22102097-22102166,22102250-22102338,
22102448-22102572,22102686-22102766,22102848-22102908,
22103002-22103060,22103134-22103273,22103391-22103480,
22103917-22103976,22104072-22104188
Length = 782
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 623 SLVAPPTWPLRRFFLVTRPGRPPPNGDFREKSM 525
SL P LRRF L P PPP+ R +S+
Sbjct: 16 SLSVPDHLRLRRFRLHLHPRPPPPHPQLRSRSL 48
>02_01_0104 -
767490-767627,768025-768158,768971-769229,769315-769403,
769624-769774,769860-770003,770611-770730,771490-771658,
771789-772087
Length = 500
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 624 VIGGAADLALAQVLPRDATGPAAAERRLQREVNVL 520
V+ A+ A LPRDA PAA RL R +N+L
Sbjct: 13 VVLAASACAEGLRLPRDAKFPAAQAERLIRSLNLL 47
>01_05_0433 - 22094784-22095659
Length = 291
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 569 PGRPPPNGDFREKSMCLPESRRTMNEGMFTTC 474
PGR PP +R K M P RR G C
Sbjct: 48 PGRVPPPPMYRPKPMQAPARRRRSRRGWCCAC 79
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +1
Query: 115 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 249
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,761
Number of Sequences: 37544
Number of extensions: 404800
Number of successful extensions: 1278
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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