Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_G16
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 308 1e-83
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 302 7e-82
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 295 6e-80
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 172 1e-42
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 6e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 49 2e-05
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 49 2e-05
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 49 2e-05
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 49 2e-05
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 49 2e-05
BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interactin... 31 3.3
BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interactin... 31 3.3
AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interactin... 31 3.3
AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein pr... 31 3.3
AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens ... 31 3.3
AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein pr... 31 3.3
AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein. 31 3.3
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 308 bits (755), Expect = 1e-83
Identities = 147/182 (80%), Positives = 159/182 (87%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 302 bits (741), Expect = 7e-82
Identities = 146/182 (80%), Positives = 157/182 (86%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 295 bits (725), Expect = 6e-80
Identities = 143/182 (78%), Positives = 155/182 (85%)
Frame = +1
Query: 79 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 258
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 259 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 438
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 439 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVTRKNLRKGQVGGAT 618
+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPGRV RKN +KGQ G
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQGGAGA 187
Query: 619 ND 624
D
Sbjct: 188 GD 189
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 172 bits (418), Expect = 1e-42
Identities = 82/103 (79%), Positives = 89/103 (86%)
Frame = +1
Query: 253 KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 432
+DP+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 433 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 561
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 6e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +1
Query: 88 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 267
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 268 LFE 276
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +1
Query: 139 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 318
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 319 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 498
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 499 IV 504
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +1
Query: 139 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 318
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 319 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 498
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 499 IV 504
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +1
Query: 139 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 318
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 319 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 498
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 499 IV 504
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +1
Query: 139 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 318
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 319 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 498
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 499 IV 504
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = +1
Query: 139 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 318
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 319 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 498
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 499 IV 504
+V
Sbjct: 149 LV 150
>BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 342 IQFHL 328
+ L
Sbjct: 511 QMYKL 515
>BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 342 IQFHL 328
+ L
Sbjct: 511 QMYKL 515
>AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interacting
protein 4 protein.
Length = 637
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 342 IQFHL 328
+ L
Sbjct: 511 QMYKL 515
>AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein
protein.
Length = 296
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 110 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 169
Query: 342 IQFHL 328
+ L
Sbjct: 170 QMYKL 174
>AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ40105 fis, clone TESTI2006383. ).
Length = 535
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 349 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 408
Query: 342 IQFHL 328
+ L
Sbjct: 409 QMYKL 413
>AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 342 IQFHL 328
+ L
Sbjct: 483 QMYKL 487
>AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein.
Length = 609
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 504 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSLEHLSLKTALQEV---LNLQTEHI 343
D+ER+ + L DT++ L D+ MMD LR+ LE + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 342 IQFHL 328
+ L
Sbjct: 483 QMYKL 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,706,226
Number of Sequences: 237096
Number of extensions: 2146614
Number of successful extensions: 9586
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9586
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -