Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_G14
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    26   0.35 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.8  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              21   9.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 45  FLIS*DKFSTAMVILEGSTDDGKSLSNEETENDDIKTSKLL 167
           F I+ DKF    V+  G  ++ + + + +    D+KTSKL+
Sbjct: 131 FKIAVDKFDRLWVLDSGLVNNNQPMCSPKLLTFDLKTSKLV 171


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 505 CECAKAFFKRETR*NFFLGSVLASCRSCIANAQALSACRSGIYSRRCSA 359
           CE  K FFKR  R +  L       +SCI + +  + C+   Y ++C A
Sbjct: 127 CEGCKGFFKRTVRKD--LSYACREEKSCIIDKRQRNRCQYCRY-QKCLA 172


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 505 CECAKAFFKRETR*NFFLGSVLASCRSCIANAQALSACRSGIYSRRCSA 359
           CE  K FFKR  R +  L       +SCI + +  + C+   Y ++C A
Sbjct: 127 CEGCKGFFKRTVRKD--LSYACREEKSCIIDKRQRNRCQYCRY-QKCLA 172


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 276 VVAEYDVNSNLDTADSLHGGAHAVAVHP 193
           VV E+D +S  +T  ++    + V +HP
Sbjct: 216 VVGEHDWSSKTETNATVLHSINKVIIHP 243


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 570 YAAWLGGILLVELQQWR 620
           Y+ W+GG +L  L  ++
Sbjct: 112 YSVWIGGSILASLSTFQ 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,829
Number of Sequences: 438
Number of extensions: 3117
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)