Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_G10
         (430 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    91   3e-19
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    81   3e-16
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    51   3e-07
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    34   0.050

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 91.1 bits (216), Expect = 3e-19
 Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
 Frame = +2

Query: 17  GTLSEEGKVSC-TLQEVEVPVISNEECRNT-KYSASMITKNMLCAGYPKTGQKDSCQGDS 190
           G+  E   +S  TL+E+ VP++S   C +   Y   +   +MLCAGY   G+ DSCQGDS
Sbjct: 183 GSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY-SYGKIDSCQGDS 241

Query: 191 GGPLIAERKHDKRYELIGVVSWGNGCARPGYPGVY 295
           GGPL+  R  D  +EL GVVSWG GCARPG PGVY
Sbjct: 242 GGPLMCAR--DGHWELTGVVSWGIGCARPGMPGVY 274


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 38/82 (46%), Positives = 54/82 (65%)
 Frame = +2

Query: 53  LQEVEVPVISNEECRNTKYSASMITKNMLCAGYPKTGQKDSCQGDSGGPLIAERKHDKRY 232
           LQ   +P+I+  +C N+    S ++++  CAGY + G  DSCQGDSGGP  A R+ D  +
Sbjct: 168 LQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGI-DSCQGDSGGPF-ACRREDGAF 225

Query: 233 ELIGVVSWGNGCARPGYPGVYT 298
            L GV+SWG+GCA+   PG+YT
Sbjct: 226 VLAGVISWGDGCAQKKQPGIYT 247


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
 Frame = +2

Query: 44  SCTLQEVEVPVISNEECRNTKYSASM----ITKNMLCAGYPKTGQKDSCQGDSGGPLIAE 211
           S TLQ   VP+IS+++C  T    S+    IT   +CAG    G   +  GDSGGPL+  
Sbjct: 180 SQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHG---TAPGDSGGPLLI- 235

Query: 212 RKHDKRYELIGVVSWG----NGCARPG-YPGVYT--TSY*TSLQLGTPRETYKRTGVTA 367
            K +  Y  IG+ S+G    +G    G +PGVYT  + Y   +Q G   +T  R+ VT+
Sbjct: 236 HKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQ-GVIGKTSMRSSVTS 293


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 33.9 bits (74), Expect = 0.050
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 167 KDSCQGDSGGPLIAERKHDKRYELIGVVSWGNGCAR 274
           K+ C GDSGG L   +    R  +I +VS+G+ C +
Sbjct: 267 KNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSDCVQ 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,567,214
Number of Sequences: 27780
Number of extensions: 188574
Number of successful extensions: 377
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)