Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_G06
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36268-1|AAC50684.2| 949|Homo sapiens beta-prime-adaptin protein. 48 1e-05
L13939-1|AAC98702.1| 949|Homo sapiens beta-prime-adaptin protein. 48 1e-05
CT841508-1|CAJ86438.1| 939|Homo sapiens AP1B1 protein. 48 1e-05
BC046242-1|AAH46242.1| 919|Homo sapiens AP1B1 protein protein. 48 1e-05
M34175-1|AAA35583.1| 937|Homo sapiens protein ( Human beta adap... 44 1e-04
BC012150-1|AAH12150.1| 556|Homo sapiens Unknown (protein for IM... 44 1e-04
BC006201-1|AAH06201.1| 951|Homo sapiens adaptor-related protein... 44 1e-04
AY341427-1|AAQ20044.1| 880|Homo sapiens beta adaptin subunit pr... 44 1e-04
>U36268-1|AAC50684.2| 949|Homo sapiens beta-prime-adaptin protein.
Length = 949
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-----------VIPNQESLIGD 274
SVYHKPP+AFVEG V KSLP R A+ VIP Q L+GD
Sbjct: 572 SVYHKPPSAFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPDVIPAQGDLLGD 631
Query: 275 LLSMDI 292
LL++D+
Sbjct: 632 LLNLDL 637
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 19 AAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AAKEVVLA+KPLIS IC+I +LA
Sbjct: 536 AAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLA 571
>L13939-1|AAC98702.1| 949|Homo sapiens beta-prime-adaptin protein.
Length = 949
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-----------VIPNQESLIGD 274
SVYHKPP+AFVEG V KSLP R A+ VIP Q L+GD
Sbjct: 572 SVYHKPPSAFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPDVIPAQGDLLGD 631
Query: 275 LLSMDI 292
LL++D+
Sbjct: 632 LLNLDL 637
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 19 AAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AAKEVVLA+KPLIS IC+I +LA
Sbjct: 536 AAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLA 571
>CT841508-1|CAJ86438.1| 939|Homo sapiens AP1B1 protein.
Length = 939
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-----------VIPNQESLIGD 274
SVYHKPP+AFVEG V KSLP R A+ VIP Q L+GD
Sbjct: 572 SVYHKPPSAFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPDVIPAQGDLLGD 631
Query: 275 LLSMDI 292
LL++D+
Sbjct: 632 LLNLDL 637
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 19 AAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AAKEVVLA+KPLIS IC+I +LA
Sbjct: 536 AAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLA 571
>BC046242-1|AAH46242.1| 919|Homo sapiens AP1B1 protein protein.
Length = 919
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-----------VIPNQESLIGD 274
SVYHKPP+AFVEG V KSLP R A+ VIP Q L+GD
Sbjct: 572 SVYHKPPSAFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPDVIPAQGDLLGD 631
Query: 275 LLSMDI 292
LL++D+
Sbjct: 632 LLNLDL 637
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 19 AAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AAKEVVLA+KPLIS IC+I +LA
Sbjct: 536 AAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLA 571
>M34175-1|AAA35583.1| 937|Homo sapiens protein ( Human beta adaptin
mRNA, complete cds. ).
Length = 937
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT----------VIPNQESLIGDL 277
SVYHKPP AFVEG RK LP + T VIP+Q L+GDL
Sbjct: 572 SVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDL 631
Query: 278 LSMDI 292
L++D+
Sbjct: 632 LNLDL 636
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 22 AKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AKEVVL++KPLIS ICHI SLA
Sbjct: 537 AKEVVLSEKPLISEETDLIEPTLLDELICHIGSLA 571
>BC012150-1|AAH12150.1| 556|Homo sapiens Unknown (protein for
IMAGE:4558274) protein.
Length = 556
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT----------VIPNQESLIGDL 277
SVYHKPP AFVEG RK LP + T VIP+Q L+GDL
Sbjct: 177 SVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDL 236
Query: 278 LSMDI 292
L++D+
Sbjct: 237 LNLDL 241
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 22 AKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AKEVVL++KPLIS ICHI SLA
Sbjct: 142 AKEVVLSEKPLISEETDLIEPTLLDELICHIGSLA 176
>BC006201-1|AAH06201.1| 951|Homo sapiens adaptor-related protein
complex 2, beta 1 subunit protein.
Length = 951
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT----------VIPNQESLIGDL 277
SVYHKPP AFVEG RK LP + T VIP+Q L+GDL
Sbjct: 572 SVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDL 631
Query: 278 LSMDI 292
L++D+
Sbjct: 632 LNLDL 636
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 22 AKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AKEVVL++KPLIS ICHI SLA
Sbjct: 537 AKEVVLSEKPLISEETDLIEPTLLDELICHIGSLA 571
>AY341427-1|AAQ20044.1| 880|Homo sapiens beta adaptin subunit
protein.
Length = 880
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Frame = +2
Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT----------VIPNQESLIGDL 277
SVYHKPP AFVEG RK LP + T VIP+Q L+GDL
Sbjct: 515 SVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDL 574
Query: 278 LSMDI 292
L++D+
Sbjct: 575 LNLDL 579
Score = 35.1 bits (77), Expect = 0.092
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 22 AKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
AKEVVL++KPLIS ICHI SLA
Sbjct: 480 AKEVVLSEKPLISEETDLIEPTLLDELICHIGSLA 514
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,457,541
Number of Sequences: 237096
Number of extensions: 851352
Number of successful extensions: 1392
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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