Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_G06
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75910-1|CAA53509.1|  921|Drosophila melanogaster beta-adaptin D...    76   2e-14
BT016054-1|AAV36939.1|  921|Drosophila melanogaster LP17054p pro...    76   2e-14
AY052092-1|AAK93516.1|  600|Drosophila melanogaster SD04106p pro...    76   2e-14
AE014298-2924|AAF49013.1|  921|Drosophila melanogaster CG12532-P...    76   2e-14

>X75910-1|CAA53509.1|  921|Drosophila melanogaster beta-adaptin
           Drosophila 1 protein.
          Length = 921

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 42/62 (67%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
 Frame = +2

Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-------VIPNQESLIGDLLSM 286
           SVYHKPPTAFVEGRGAGVRKSLP R A                  VIPNQESLIGDLLSM
Sbjct: 573 SVYHKPPTAFVEGRGAGVRKSLPNRAAGSAAGAEQAENAAGSEAMVIPNQESLIGDLLSM 632

Query: 287 DI 292
           DI
Sbjct: 633 DI 634



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/37 (62%), Positives = 23/37 (62%)
 Frame = +1

Query: 16  AAAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
           AAAKEVVLADKPLIS              ICHISSLA
Sbjct: 536 AAAKEVVLADKPLISEETDLLEPTLLDELICHISSLA 572


>BT016054-1|AAV36939.1|  921|Drosophila melanogaster LP17054p
           protein.
          Length = 921

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 42/62 (67%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
 Frame = +2

Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-------VIPNQESLIGDLLSM 286
           SVYHKPPTAFVEGRGAGVRKSLP R A                  VIPNQESLIGDLLSM
Sbjct: 573 SVYHKPPTAFVEGRGAGVRKSLPNRAAGSAAGAEQAENAAGSEAMVIPNQESLIGDLLSM 632

Query: 287 DI 292
           DI
Sbjct: 633 DI 634



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/37 (62%), Positives = 23/37 (62%)
 Frame = +1

Query: 16  AAAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
           AAAKEVVLADKPLIS              ICHISSLA
Sbjct: 536 AAAKEVVLADKPLISEETDLLEPTLLDELICHISSLA 572


>AY052092-1|AAK93516.1|  600|Drosophila melanogaster SD04106p
           protein.
          Length = 600

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 42/62 (67%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
 Frame = +2

Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-------VIPNQESLIGDLLSM 286
           SVYHKPPTAFVEGRGAGVRKSLP R A                  VIPNQESLIGDLLSM
Sbjct: 252 SVYHKPPTAFVEGRGAGVRKSLPNRAAGSAAGAEQAENAAGSEAMVIPNQESLIGDLLSM 311

Query: 287 DI 292
           DI
Sbjct: 312 DI 313



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/37 (62%), Positives = 23/37 (62%)
 Frame = +1

Query: 16  AAAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
           AAAKEVVLADKPLIS              ICHISSLA
Sbjct: 215 AAAKEVVLADKPLISEETDLLEPTLLDELICHISSLA 251


>AE014298-2924|AAF49013.1|  921|Drosophila melanogaster CG12532-PA
           protein.
          Length = 921

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 42/62 (67%), Positives = 42/62 (67%), Gaps = 7/62 (11%)
 Frame = +2

Query: 128 SVYHKPPTAFVEGRGAGVRKSLPARGAAXXXXXXXXXT-------VIPNQESLIGDLLSM 286
           SVYHKPPTAFVEGRGAGVRKSLP R A                  VIPNQESLIGDLLSM
Sbjct: 573 SVYHKPPTAFVEGRGAGVRKSLPNRAAGSAAGAEQAENAAGSEAMVIPNQESLIGDLLSM 632

Query: 287 DI 292
           DI
Sbjct: 633 DI 634



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/37 (62%), Positives = 23/37 (62%)
 Frame = +1

Query: 16  AAAKEVVLADKPLISXXXXXXXXXXXXXXICHISSLA 126
           AAAKEVVLADKPLIS              ICHISSLA
Sbjct: 536 AAAKEVVLADKPLISEETDLLEPTLLDELICHISSLA 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,001,304
Number of Sequences: 53049
Number of extensions: 266811
Number of successful extensions: 624
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)