Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_G04
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   3.1  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   3.1  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   3.1  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   3.1  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   3.1  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   3.1  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   5.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   5.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   9.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   9.5  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 332 SILSQSHNETYAFPSNYKQIC 270
           S LS ++N +    +NYKQ+C
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLC 103


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 332 SILSQSHNETYAFPSNYKQIC 270
           S LS ++N +    +NYKQ+C
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLC 103


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 332 SILSQSHNETYAFPSNYKQIC 270
           S LS ++N +    +NYKQ+C
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLC 103


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 332 SILSQSHNETYAFPSNYKQIC 270
           S LS ++N +    +NYKQ+C
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLC 103


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 332 SILSQSHNETYAFPSNYKQIC 270
           S LS ++N +    +NYKQ+C
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLC 103


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 332 SILSQSHNETYAFPSNYKQIC 270
           S LS ++N +    +NYKQ+C
Sbjct: 83  SSLSNNYNYSNYNNNNYKQLC 103


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 361 KKYLSKEVLD 390
           KKYLSK+V D
Sbjct: 11  KKYLSKDVFD 20


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 361 KKYLSKEVLD 390
           KKYLSK+V D
Sbjct: 27  KKYLSKDVFD 36


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 310 TKHMLFPLIINKYVSY 263
           TK+M FP I   Y +Y
Sbjct: 154 TKYMKFPAIYEIYPNY 169


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 310 TKHMLFPLIINKYVSY 263
           TK+M FP I   Y +Y
Sbjct: 154 TKYMKFPAIYEIYPNY 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,612
Number of Sequences: 438
Number of extensions: 2190
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)