Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F22
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    27   0.29 
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   3.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   4.6  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    22   8.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.1  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    22   8.1  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 27.1 bits (57), Expect = 0.29
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = +1

Query: 43  DDVCLTTQSQTKGE*YELLEVAWYTSMLRNLRRSRGVVSARVNYAVIQPARPAERSRLCY 222
           D  C  T S+ K        V W+TS++ +LRR     S     A   P  P +R     
Sbjct: 258 DKACDATMSRLKKT-CRWRGVYWWTSVIADLRRKSKAASRVAQRAYDTPEFPDKRREYKL 316

Query: 223 RKKTVKR 243
            +  +KR
Sbjct: 317 ARNALKR 323


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 383 IYLAAFLPDFMLACCAFR 330
           +Y     PD  L CC FR
Sbjct: 58  LYKKRIFPDDQLTCCVFR 75


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 6/26 (23%), Positives = 18/26 (69%)
 Frame = -1

Query: 231 LLAVAETRTLCGPRGLDNRVVYSCTD 154
           + +++  + + G RG++NR++Y  ++
Sbjct: 303 IYSLSTVKAVDGDRGINNRIIYGISN 328


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 370 PFCQTLCW 347
           P+C+T+CW
Sbjct: 267 PWCRTMCW 274


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 241 RVYGGVLCHKCVKQ 282
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
          transcription factor protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 3  TRKSYKMVQRLTFRRRLSYNTKSNQRR 83
          TR+SY   Q +   +   +N   N+RR
Sbjct: 9  TRQSYSRHQTIELEKEFHFNRYLNRRR 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,661
Number of Sequences: 2352
Number of extensions: 6076
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)