Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F20
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X66699-1|CAA47244.1|   92|Homo sapiens ribosomal protein L37a pr...   152   8e-37
L06499-1|AAA60280.1|   92|Homo sapiens ribosomal protein L37a pr...   152   8e-37
CR542152-1|CAG46949.1|   92|Homo sapiens RPL37A protein.              152   8e-37
BC082239-1|AAH82239.1|   92|Homo sapiens ribosomal protein L37a ...   152   8e-37
BC067789-1|AAH67789.1|   92|Homo sapiens ribosomal protein L37a ...   152   8e-37
BC016748-1|AAH16748.1|   92|Homo sapiens ribosomal protein L37a ...   152   8e-37
BC014262-1|AAH14262.1|   92|Homo sapiens ribosomal protein L37a ...   152   8e-37
AC073321-2|AAY15078.1|   92|Homo sapiens unknown protein.             152   8e-37
BC000555-1|AAH00555.2|   91|Homo sapiens RPL37A protein protein.      150   3e-36
BC063476-1|AAH63476.1|   72|Homo sapiens RPL37A protein protein.      130   3e-30

>X66699-1|CAA47244.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>L06499-1|AAA60280.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>CR542152-1|CAG46949.1|   92|Homo sapiens RPL37A protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>BC082239-1|AAH82239.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>BC067789-1|AAH67789.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>BC016748-1|AAH16748.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>BC014262-1|AAH14262.1|   92|Homo sapiens ribosomal protein L37a
           protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>AC073321-2|AAY15078.1|   92|Homo sapiens unknown protein.
          Length = 92

 Score =  152 bits (368), Expect = 8e-37
 Identities = 66/90 (73%), Positives = 78/90 (86%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 287
            +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90


>BC000555-1|AAH00555.2|   91|Homo sapiens RPL37A protein protein.
          Length = 91

 Score =  150 bits (363), Expect = 3e-36
 Identities = 65/89 (73%), Positives = 77/89 (86%)
 Frame = +3

Query: 21  AKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCK 200
           AKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C 
Sbjct: 1   AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 60

Query: 201 RTVAGGAWVFSTTAASSCRSAVRRLREVK 287
           +TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61  KTVAGGAWTYNTTSAVTVKSAIRRLKELK 89


>BC063476-1|AAH63476.1|   72|Homo sapiens RPL37A protein protein.
          Length = 72

 Score =  130 bits (314), Expect = 3e-30
 Identities = 56/71 (78%), Positives = 61/71 (85%)
 Frame = +3

Query: 18  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 197
           MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK  MKR  VGIW C  C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60

Query: 198 KRTVAGGAWVF 230
            +TVAGGAW +
Sbjct: 61  MKTVAGGAWTY 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,717,091
Number of Sequences: 237096
Number of extensions: 1295202
Number of successful extensions: 7612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7612
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)