Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F18
         (490 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016148-1|AAV37033.1|  526|Drosophila melanogaster AT18987p pro...    29   3.4  
AY075207-1|AAL68075.1|  526|Drosophila melanogaster AT14419p pro...    29   3.4  
AE014296-3646|AAF51801.3|  572|Drosophila melanogaster CG7140-PA...    29   3.4  
Z11704-1|CAA77765.1|  148|Drosophila melanogaster homeobox prote...    28   7.9  
Y08822-1|CAA70057.1|  372|Drosophila melanogaster ladybird late ...    28   7.9  
AE014297-3009|AAF55895.1|  372|Drosophila melanogaster CG6570-PA...    28   7.9  

>BT016148-1|AAV37033.1|  526|Drosophila melanogaster AT18987p
           protein.
          Length = 526

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 77  TADEFMRMTIRRQSEELDSRDIENNVFVHD 166
           T + FMRM ++RQ E++  R+ E N+ V D
Sbjct: 377 TEEVFMRMRLKRQGEDICLRESEINLRVDD 406


>AY075207-1|AAL68075.1|  526|Drosophila melanogaster AT14419p
           protein.
          Length = 526

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 77  TADEFMRMTIRRQSEELDSRDIENNVFVHD 166
           T + FMRM ++RQ E++  R+ E N+ V D
Sbjct: 377 TEEVFMRMRLKRQGEDICLRESEINLRVDD 406


>AE014296-3646|AAF51801.3|  572|Drosophila melanogaster CG7140-PA
           protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 77  TADEFMRMTIRRQSEELDSRDIENNVFVHD 166
           T + FMRM ++RQ E++  R+ E N+ V D
Sbjct: 423 TEEVFMRMRLKRQGEDICLRESEINLRVDD 452


>Z11704-1|CAA77765.1|  148|Drosophila melanogaster homeobox protein
           protein.
          Length = 148

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1

Query: 211 RRIRVQEDLRKVEKILMYHKMSTNKRSIKNI 303
           RR +++ D+ +++K +   KMS N+  +KN+
Sbjct: 78  RRAKLKRDMEELKKDVQCEKMSANQSFLKNV 108


>Y08822-1|CAA70057.1|  372|Drosophila melanogaster ladybird late
           homeodomain transcriptionfactor protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1

Query: 211 RRIRVQEDLRKVEKILMYHKMSTNKRSIKNI 303
           RR +++ D+ +++K +   KMS N+  +KN+
Sbjct: 302 RRAKLKRDMEELKKDVQCEKMSANQSFLKNV 332


>AE014297-3009|AAF55895.1|  372|Drosophila melanogaster CG6570-PA
           protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1

Query: 211 RRIRVQEDLRKVEKILMYHKMSTNKRSIKNI 303
           RR +++ D+ +++K +   KMS N+  +KN+
Sbjct: 302 RRAKLKRDMEELKKDVQCEKMSANQSFLKNV 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,369,730
Number of Sequences: 53049
Number of extensions: 268822
Number of successful extensions: 736
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)