Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F16
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   3.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.2  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   4.2  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 336 CLCPRVVVH*ALRSPILKPWNFKICQIARAYTERLIAPAKN*DLRI 473
           CLC +      + SPIL P + +  Q+  A    L++ A+  + R+
Sbjct: 5   CLCSKEKKRPQISSPILNPEDTQKLQLLPAVRRPLLSDAEKLEQRL 50


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 61  STSPPATNSDRRSFFDEKSESAV-NRCTIT 147
           S++PP++   RR FF+  + S+V +  TIT
Sbjct: 531 SSAPPSSIVSRRRFFNTSASSSVTSEGTIT 560


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 61  STSPPATNSDRRSFFDEKSESAV-NRCTIT 147
           S++PP++   RR FF+  + S+V +  TIT
Sbjct: 532 SSAPPSSIVSRRRFFNTSASSSVTSEGTIT 561


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,764
Number of Sequences: 2352
Number of extensions: 10601
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)