Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F16
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   6.7  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   6.7  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   6.7  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   6.7  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   6.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.9  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 79  TNSDRRSFFDEKSESAVNRCTITSY 153
           TNS+     D  S+S + R  ++SY
Sbjct: 305 TNSEETHQKDGSSDSVIKRTVVSSY 329


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 79  TNSDRRSFFDEKSESAVNRCTITSY 153
           TNS+     D  S+S + R  ++SY
Sbjct: 220 TNSEETHQKDGSSDSVIKRTVVSSY 244


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 79  TNSDRRSFFDEKSESAVNRCTITSY 153
           TNS+     D  S+S + R  ++SY
Sbjct: 539 TNSEETHQKDGSSDSVIKRTVVSSY 563


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 226 LHTFSHPF*H*NRHYYRQ*HCS 161
           L + +H F H + HY R+  CS
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCS 238


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 226 LHTFSHPF*H*NRHYYRQ*HCS 161
           L + +H F H + HY R+  CS
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCS 238


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 226 LHTFSHPF*H*NRHYYRQ*HCS 161
           L + +H F H + HY R+  CS
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCS 238


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 226 LHTFSHPF*H*NRHYYRQ*HCS 161
           L + +H F H + HY R+  CS
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCS 238


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 226 LHTFSHPF*H*NRHYYRQ*HCS 161
           L + +H F H + HY R+  CS
Sbjct: 206 LRSRTHGFQHTSSHYSRERSCS 227


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 226 LHTFSHPF*H*NRHYYRQ*HCS 161
           L + +H F H + HY R+  CS
Sbjct: 217 LRSRTHGFQHTSSHYSRERSCS 238


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +2

Query: 380 HFEALELQNLSNCE 421
           H E ++++N  NC+
Sbjct: 210 HMEVIKIKNFDNCD 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,162
Number of Sequences: 438
Number of extensions: 2757
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)