Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_F15
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein. 115 2e-25
CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein. 115 2e-25
BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfam... 115 2e-25
AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor... 115 2e-25
L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone re... 110 4e-24
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 104 3e-22
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 104 3e-22
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 104 3e-22
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 104 3e-22
Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor R... 88 3e-17
BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan rece... 88 3e-17
BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan rece... 88 3e-17
BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan rece... 88 3e-17
AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan rece... 88 3e-17
AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan rece... 88 3e-17
M24900-1|AAA52332.1| 136|Homo sapiens triiodothyronine receptor... 87 4e-17
U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein. 84 5e-16
U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein. 84 5e-16
U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein. 84 5e-16
BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan rece... 84 5e-16
BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan rece... 84 5e-16
BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan rece... 84 5e-16
BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan rece... 84 5e-16
BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan rece... 84 5e-16
L14611-1|AAA02963.1| 468|Homo sapiens transcription factor prot... 83 7e-16
U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor L... 75 3e-13
BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfam... 75 3e-13
BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein. 75 3e-13
X90563-2|CAA62153.1| 475|Homo sapiens peroxisome proliferator a... 73 1e-12
X90563-1|CAA62152.1| 477|Homo sapiens peroxisome proliferator a... 73 1e-12
U79012-1|AAC51248.1| 505|Homo sapiens ligand activated transcri... 73 1e-12
U63415-1|AAB04028.1| 505|Homo sapiens peroxisome proliferator a... 73 1e-12
L40904-1|AAA80314.2| 477|Homo sapiens peroxisome proliferator a... 73 1e-12
L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator a... 73 1e-12
D83233-1|BAA18949.1| 506|Homo sapiens PPAR gamma2 protein. 73 1e-12
BT007281-1|AAP35945.1| 477|Homo sapiens peroxisome proliferativ... 73 1e-12
BC006811-1|AAH06811.1| 477|Homo sapiens peroxisome proliferator... 73 1e-12
AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator... 73 1e-12
AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferativ... 73 1e-12
AY222643-1|AAO66458.1| 584|Homo sapiens CREB3L2-PPARgamma protein. 73 1e-12
AY157024-1|AAN38992.2| 475|Homo sapiens peroxisome proliferativ... 73 1e-12
AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferativ... 73 1e-12
AK223528-1|BAD97248.1| 478|Homo sapiens peroxisome proliferativ... 73 1e-12
AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferativ... 73 1e-12
S74349-1|AAB32649.1| 468|Homo sapiens peroxisome proliferator a... 72 2e-12
L02932-1|AAA36468.1| 468|Homo sapiens peroxisome proliferator a... 72 2e-12
CR457435-1|CAG33716.1| 468|Homo sapiens PPARA protein. 72 2e-12
CR456547-1|CAG30433.1| 468|Homo sapiens PPARA protein. 72 2e-12
AY206718-1|AAO13489.1| 468|Homo sapiens peroxisome proliferativ... 72 2e-12
AL078611-2|CAI18764.1| 468|Homo sapiens peroxisome proliferativ... 72 2e-12
AL049856-1|CAI22450.1| 468|Homo sapiens peroxisome proliferativ... 72 2e-12
BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein. 71 3e-12
Y07619-1|CAA68898.1| 468|Homo sapiens peroxisome proliferator-a... 71 4e-12
X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for ... 71 4e-12
X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for ... 71 4e-12
U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic ac... 71 4e-12
U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic ac... 71 4e-12
S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor al... 71 4e-12
M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein. 71 4e-12
CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein. 71 4e-12
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 71 4e-12
BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,... 71 4e-12
AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor ... 71 4e-12
X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for ... 71 5e-12
Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA ... 70 9e-12
CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein. 69 1e-11
BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,... 69 1e-11
AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor ... 69 1e-11
AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor ... 69 1e-11
U68233-1|AAB08107.1| 472|Homo sapiens farnesol receptor HRR-1 p... 68 3e-11
BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein. 68 3e-11
BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein. 68 3e-11
AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor be... 68 3e-11
AF478445-1|AAM53550.1| 482|Homo sapiens farnesoid-X-receptor be... 68 3e-11
AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein. 68 3e-11
U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein. 68 4e-11
U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein. 68 4e-11
BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfam... 68 4e-11
BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfam... 68 4e-11
BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfam... 68 4e-11
BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein. 68 4e-11
BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfam... 68 4e-11
CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein. 66 8e-11
M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-ga... 66 1e-10
M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid receptor-ga... 66 1e-10
M24857-1|AAA52692.1| 454|Homo sapiens RARG protein. 66 1e-10
BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,... 66 1e-10
BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,... 66 1e-10
AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor ... 66 1e-10
X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitam... 65 2e-10
J03258-1|AAA61273.1| 427|Homo sapiens VDR protein. 65 2e-10
BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein. 65 2e-10
AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D (1,25-dihydro... 65 2e-10
AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor prot... 65 2e-10
AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor prot... 65 2e-10
X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor ... 62 2e-09
M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1 ... 62 2e-09
EF614253-1|ABR09276.1| 473|Homo sapiens nuclear receptor subfam... 62 2e-09
DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor... 62 2e-09
DQ911122-1|ABJ52965.1| 434|Homo sapiens orphan nuclear receptor... 62 2e-09
CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein. 62 2e-09
BC017304-1|AAH17304.2| 433|Homo sapiens NR1I2 protein protein. 62 2e-09
BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein. 62 2e-09
AY091855-1|AAM26736.1| 434|Homo sapiens steroid and xenobiotic ... 62 2e-09
AJ009937-3|CAB55494.1| 342|Homo sapiens nuclear hormone recepto... 62 2e-09
AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone recepto... 62 2e-09
AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone recepto... 62 2e-09
AJ009936-3|CAB55491.1| 379|Homo sapiens nuclear hormone recepto... 62 2e-09
AJ009936-2|CAB55490.1| 457|Homo sapiens nuclear hormone recepto... 62 2e-09
AJ009936-1|CAB55489.1| 434|Homo sapiens nuclear hormone recepto... 62 2e-09
AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor... 62 2e-09
AF364606-2|AAK38720.1| 434|Homo sapiens orphan nuclear receptor... 62 2e-09
AF364606-1|AAK38722.1| 473|Homo sapiens orphan nuclear receptor... 62 2e-09
AF084645-1|AAC64558.1| 434|Homo sapiens orphan nuclear receptor... 62 2e-09
AF084644-1|AAC64557.1| 473|Homo sapiens orphan nuclear receptor... 62 2e-09
AF061056-1|AAD05436.1| 434|Homo sapiens orphan nuclear receptor... 62 2e-09
AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone recepto... 62 2e-09
X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor ... 61 4e-09
AB005526-1|BAA23354.1| 474|Homo sapiens peroxisome proliferator... 59 1e-08
U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma... 58 2e-08
CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein. 58 2e-08
BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, ga... 58 2e-08
AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, ga... 58 2e-08
U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein. 58 3e-08
CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein. 58 3e-08
BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan rece... 58 3e-08
BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan rece... 58 3e-08
AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan rec... 58 3e-08
AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan rec... 58 3e-08
AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan rece... 58 3e-08
X75918-1|CAA53518.1| 598|Homo sapiens NOT protein. 57 7e-08
M34340-1|AAA36562.2| 70|Homo sapiens putative Rev-ErbA-alpha p... 57 7e-08
BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfam... 57 7e-08
BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfam... 57 7e-08
AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfam... 57 7e-08
AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein. 57 7e-08
AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor... 57 7e-08
AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein. 57 7e-08
S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein. 56 9e-08
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 56 1e-07
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 56 1e-07
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 56 1e-07
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 56 1e-07
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 56 1e-07
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 56 1e-07
BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein. 54 4e-07
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 54 6e-07
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 54 6e-07
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 54 6e-07
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 54 6e-07
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 54 6e-07
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 54 6e-07
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 54 6e-07
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 54 6e-07
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 54 6e-07
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 54 6e-07
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 54 6e-07
AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens ... 53 8e-07
M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid r... 52 1e-06
X65463-1|CAA46456.1| 231|Homo sapiens MHC class I promoter bind... 52 2e-06
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 52 2e-06
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 52 2e-06
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 52 2e-06
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 52 2e-06
L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein. 52 2e-06
D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein. 52 2e-06
CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein. 52 2e-06
BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfam... 52 2e-06
BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfam... 52 2e-06
Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA ... 51 4e-06
M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor... 51 4e-06
J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor ... 51 4e-06
BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone recepto... 51 4e-06
BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone recepto... 51 4e-06
Z30425-1|CAA83016.1| 348|Homo sapiens orphan nuclear hormone re... 50 6e-06
AY572827-1|AAT47180.1| 319|Homo sapiens constitutive androstane... 50 6e-06
AL590714-14|CAH72154.1| 348|Homo sapiens nuclear receptor subfa... 50 6e-06
X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor ... 50 8e-06
BC069626-1|AAH69626.1| 352|Homo sapiens nuclear receptor subfam... 45 2e-04
AY572818-1|AAT47171.1| 288|Homo sapiens constitutive androstane... 45 2e-04
AL590714-13|CAH72153.1| 352|Homo sapiens nuclear receptor subfa... 45 2e-04
U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein. 43 9e-04
L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein. 43 0.001
AY572819-1|AAT47172.1| 321|Homo sapiens constitutive androstane... 40 0.008
U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein transc... 39 0.014
U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription... 39 0.014
BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfam... 39 0.014
BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfam... 39 0.014
AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcripti... 39 0.014
AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcripti... 39 0.014
AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding ... 39 0.014
AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcripti... 39 0.014
AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein ... 39 0.014
BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein. 38 0.043
BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein. 38 0.043
AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferativ... 38 0.043
AY827087-1|AAV85448.1| 85|Homo sapiens vitamin D receptor prot... 36 0.13
Y16186-1|CAA76112.1| 157|Homo sapiens peroxisome proliferator-a... 35 0.23
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m... 31 2.8
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 31 2.8
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m... 31 2.8
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 31 2.8
X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for ... 31 3.8
BC058929-1|AAH58929.1| 174|Homo sapiens ubiquitin-like 4B protein. 31 5.0
AK098556-1|BAC05331.1| 174|Homo sapiens protein ( Homo sapiens ... 31 5.0
X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal... 30 8.7
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 30 8.7
BT009771-1|AAP88773.1| 614|Homo sapiens histone deacetylase 7A ... 30 8.7
BC064840-1|AAH64840.1| 954|Homo sapiens HDAC7A protein protein. 30 8.7
BC020505-1|AAH20505.2| 711|Homo sapiens HDAC7A protein protein. 30 8.7
BC006453-1|AAH06453.1| 276|Homo sapiens HDAC7A protein protein. 30 8.7
AY358336-1|AAQ88702.1| 509|Homo sapiens DFLL295 protein. 30 8.7
AY321367-1|AAP84704.1| 915|Homo sapiens histone deacetylase 7A ... 30 8.7
AY302468-1|AAQ18232.1| 991|Homo sapiens histone deacetylase pro... 30 8.7
AL117455-1|CAB55935.1| 878|Homo sapiens hypothetical protein pr... 30 8.7
AK027781-1|BAB55363.1| 184|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK024469-1|BAB15759.1| 484|Homo sapiens FLJ00062 protein protein. 30 8.7
AK001190-1|BAA91545.1| 614|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK001032-1|BAA91474.1| 276|Homo sapiens protein ( Homo sapiens ... 30 8.7
>D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein.
Length = 579
Score = 115 bits (276), Expect = 2e-25
Identities = 54/147 (36%), Positives = 93/147 (63%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G F+ L VR +FDA ++ L+G+ D + S A L++S F+F
Sbjct: 431 QHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS-MGAGDLLNSMFEF 489
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++N++ L+D E+ LF ++VL++ DR G+ N+ VE + L L+T+I +N P+
Sbjct: 490 SEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEAS 549
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LPDLR+L+ +H+E+L+ F+
Sbjct: 550 IFTKLLLKLPDLRSLNNMHSEELLAFK 576
>CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein.
Length = 579
Score = 115 bits (276), Expect = 2e-25
Identities = 54/147 (36%), Positives = 93/147 (63%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G F+ L VR +FDA ++ L+G+ D + S A L++S F+F
Sbjct: 431 QHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS-MGAGDLLNSMFEF 489
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++N++ L+D E+ LF ++VL++ DR G+ N+ VE + L L+T+I +N P+
Sbjct: 490 SEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEAS 549
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LPDLR+L+ +H+E+L+ F+
Sbjct: 550 IFTKLLLKLPDLRSLNNMHSEELLAFK 576
>BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfamily
1, group D, member 2 protein.
Length = 579
Score = 115 bits (276), Expect = 2e-25
Identities = 54/147 (36%), Positives = 93/147 (63%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G F+ L VR +FDA ++ L+G+ D + S A L++S F+F
Sbjct: 431 QHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS-MGAGDLLNSMFEF 489
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++N++ L+D E+ LF ++VL++ DR G+ N+ VE + L L+T+I +N P+
Sbjct: 490 SEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEAS 549
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LPDLR+L+ +H+E+L+ F+
Sbjct: 550 IFTKLLLKLPDLRSLNNMHSEELLAFK 576
>AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor
NR1D2 variant protein.
Length = 549
Score = 115 bits (276), Expect = 2e-25
Identities = 54/147 (36%), Positives = 93/147 (63%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G F+ L VR +FDA ++ L+G+ D + S A L++S F+F
Sbjct: 401 QHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS-MGAGDLLNSMFEF 459
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++N++ L+D E+ LF ++VL++ DR G+ N+ VE + L L+T+I +N P+
Sbjct: 460 SEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEAS 519
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LPDLR+L+ +H+E+L+ F+
Sbjct: 520 IFTKLLLKLPDLRSLNNMHSEELLAFK 546
>L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone
receptor BD73 protein.
Length = 579
Score = 110 bits (265), Expect = 4e-24
Identities = 55/148 (37%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G F+ L VR +FDA ++ L+G+ D + S A L++S F+F
Sbjct: 430 QHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS-MGAGDLLNSMFEF 488
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLR-NIELVERMHSRLKGCLQTVIAQNRPDRP 381
+E++N++ L+D E+ LF ++VL++ DR G R N+ VE + L L+T+I +N P+
Sbjct: 489 SEKLNALQLSDEEMSLFTAVVLVSADRSGNRKNVNSVEALQETLIRALRTLIMKNHPNEA 548
Query: 382 GFLRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LPDLR+L+ +H+E+L+ F+
Sbjct: 549 SIFTKLLLKLPDLRSLNNMHSEELLAFK 576
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 104 bits (250), Expect = 3e-22
Identities = 52/149 (34%), Positives = 88/149 (59%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ TLLK+G F+ L VR +F+ +++ L+ + L+ + F F
Sbjct: 465 QHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQEL-GAMGMGDLLSAMFDF 523
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++NS+ LT+ E+GLF ++VL++ DR G+ N VE++ L L+ ++ +NRP
Sbjct: 524 SEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETS 583
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L+ LPDLRTL+ +H+EKL+ FR +
Sbjct: 584 RFTKLLLKLPDLRTLNNMHSEKLLSFRVD 612
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 104 bits (250), Expect = 3e-22
Identities = 52/149 (34%), Positives = 88/149 (59%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ TLLK+G F+ L VR +F+ +++ L+ + L+ + F F
Sbjct: 465 QHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQEL-GAMGMGDLLSAMFDF 523
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++NS+ LT+ E+GLF ++VL++ DR G+ N VE++ L L+ ++ +NRP
Sbjct: 524 SEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETS 583
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L+ LPDLRTL+ +H+EKL+ FR +
Sbjct: 584 RFTKLLLKLPDLRTLNNMHSEKLLSFRVD 612
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 104 bits (250), Expect = 3e-22
Identities = 52/149 (34%), Positives = 88/149 (59%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ TLLK+G F+ L VR +F+ +++ L+ + L+ + F F
Sbjct: 465 QHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQEL-GAMGMGDLLSAMFDF 523
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++NS+ LT+ E+GLF ++VL++ DR G+ N VE++ L L+ ++ +NRP
Sbjct: 524 SEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETS 583
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L+ LPDLRTL+ +H+EKL+ FR +
Sbjct: 584 RFTKLLLKLPDLRTLNNMHSEKLLSFRVD 612
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 104 bits (250), Expect = 3e-22
Identities = 52/149 (34%), Positives = 88/149 (59%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ TLLK+G F+ L VR +F+ +++ L+ + L+ + F F
Sbjct: 465 QHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQEL-GAMGMGDLLSAMFDF 523
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+E++NS+ LT+ E+GLF ++VL++ DR G+ N VE++ L L+ ++ +NRP
Sbjct: 524 SEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETS 583
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L+ LPDLRTL+ +H+EKL+ FR +
Sbjct: 584 RFTKLLLKLPDLRTLNNMHSEKLLSFRVD 612
>Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor
ROR-beta protein.
Length = 459
Score = 87.8 bits (208), Expect = 3e-17
Identities = 53/154 (34%), Positives = 84/154 (54%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLKSG + + VR+ F+ PLN+ + G+ ++ + LV+ F F
Sbjct: 288 QNDQILLLKSGCLEVVLVRMCRAFN-PLNNTVLFEGKYGGMQMFKA-LGSDDLVNEAFDF 345
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A+ + S+ LT+ EI LF S VLI+PDR L V+++ ++ LQ VI +N D
Sbjct: 346 AKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLD-DE 404
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELL 486
L +L+ +P + + LH EKL VF+ H E++
Sbjct: 405 TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIV 438
>BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 87.8 bits (208), Expect = 3e-17
Identities = 53/154 (34%), Positives = 84/154 (54%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLKSG + + VR+ F+ PLN+ + G+ ++ + LV+ F F
Sbjct: 288 QNDQILLLKSGCLEVVLVRMCRAFN-PLNNTVLFEGKYGGMQMFKA-LGSDDLVNEAFDF 345
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A+ + S+ LT+ EI LF S VLI+PDR L V+++ ++ LQ VI +N D
Sbjct: 346 AKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLD-DE 404
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELL 486
L +L+ +P + + LH EKL VF+ H E++
Sbjct: 405 TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIV 438
>BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 87.8 bits (208), Expect = 3e-17
Identities = 53/154 (34%), Positives = 84/154 (54%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLKSG + + VR+ F+ PLN+ + G+ ++ + LV+ F F
Sbjct: 288 QNDQILLLKSGCLEVVLVRMCRAFN-PLNNTVLFEGKYGGMQMFKA-LGSDDLVNEAFDF 345
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A+ + S+ LT+ EI LF S VLI+PDR L V+++ ++ LQ VI +N D
Sbjct: 346 AKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLD-DE 404
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELL 486
L +L+ +P + + LH EKL VF+ H E++
Sbjct: 405 TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIV 438
>BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 87.8 bits (208), Expect = 3e-17
Identities = 53/154 (34%), Positives = 84/154 (54%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLKSG + + VR+ F+ PLN+ + G+ ++ + LV+ F F
Sbjct: 288 QNDQILLLKSGCLEVVLVRMCRAFN-PLNNTVLFEGKYGGMQMFKA-LGSDDLVNEAFDF 345
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A+ + S+ LT+ EI LF S VLI+PDR L V+++ ++ LQ VI +N D
Sbjct: 346 AKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLD-DE 404
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELL 486
L +L+ +P + + LH EKL VF+ H E++
Sbjct: 405 TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIV 438
>AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 87.8 bits (208), Expect = 3e-17
Identities = 53/154 (34%), Positives = 84/154 (54%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLKSG + + VR+ F+ PLN+ + G+ ++ + LV+ F F
Sbjct: 288 QNDQILLLKSGCLEVVLVRMCRAFN-PLNNTVLFEGKYGGMQMFKA-LGSDDLVNEAFDF 345
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A+ + S+ LT+ EI LF S VLI+PDR L V+++ ++ LQ VI +N D
Sbjct: 346 AKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLD-DE 404
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELL 486
L +L+ +P + + LH EKL VF+ H E++
Sbjct: 405 TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIV 438
>AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 87.8 bits (208), Expect = 3e-17
Identities = 53/154 (34%), Positives = 84/154 (54%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLKSG + + VR+ F+ PLN+ + G+ ++ + LV+ F F
Sbjct: 288 QNDQILLLKSGCLEVVLVRMCRAFN-PLNNTVLFEGKYGGMQMFKA-LGSDDLVNEAFDF 345
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A+ + S+ LT+ EI LF S VLI+PDR L V+++ ++ LQ VI +N D
Sbjct: 346 AKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLD-DE 404
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELL 486
L +L+ +P + + LH EKL VF+ H E++
Sbjct: 405 TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIV 438
>M24900-1|AAA52332.1| 136|Homo sapiens triiodothyronine receptor
protein.
Length = 136
Score = 87.4 bits (207), Expect = 4e-17
Identities = 39/97 (40%), Positives = 65/97 (67%)
Frame = +1
Query: 181 LVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIA 360
L+ + F F+E++NS+ LT+ E+GLF ++VL++ DR G+ N VE++ L L+ ++
Sbjct: 38 LLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVL 97
Query: 361 QNRPDRPGFLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+NRP +L+ LPDLRTL+ +H+EKL+ FR +
Sbjct: 98 KNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRVD 134
>U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein.
Length = 548
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 374 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 431
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 432 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 490
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 491 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 525
>U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein.
Length = 556
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 382 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 439
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 440 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 498
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 499 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 533
>U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein.
Length = 523
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 349 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 406
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 407 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 465
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 466 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 500
>BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 294 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 351
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 352 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 410
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 411 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 445
>BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 294 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 351
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 352 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 410
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 411 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 445
>BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 294 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 351
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 352 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 410
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 411 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 445
>BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 294 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 351
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 352 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 410
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 411 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 445
>BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan
receptor A protein.
Length = 523
Score = 83.8 bits (198), Expect = 5e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 349 QNDQIVLLKAGSLEVVFIRMCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 406
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 407 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 465
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 466 ILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 500
>L14611-1|AAA02963.1| 468|Homo sapiens transcription factor
protein.
Length = 468
Score = 83.4 bits (197), Expect = 7e-16
Identities = 47/155 (30%), Positives = 87/155 (56%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + +F+R+ FD+ N+ + +G+ D +S + F+F
Sbjct: 294 QNDQIVLLKAGSLEVVFIRVCRAFDSQ-NNTVYFDGKYASPDVFKS-LGCEDFISFVFEF 351
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ + SM+LT+ EI LF + VL++ DR L+ +E++ +++ LQ V+ +N + G
Sbjct: 352 GKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHRE-DG 410
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEHKELLR 489
L +L+ + LR L HTEKL+ F+ + +++R
Sbjct: 411 MLTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 445
>U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor
LXR-alpha protein.
Length = 447
Score = 74.5 bits (175), Expect = 3e-13
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNG-QLMKKDSIQSGANARFLVDSTFK 201
+ED+ LLK+ + + + ++ SI L ++D ++G F ++ F+
Sbjct: 283 REDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFE 341
Query: 202 FAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-DR 378
F+ MN + L DAE L +I + + DRP +++ VER+ L ++ + P DR
Sbjct: 342 FSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDR 401
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 402 LMFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 447
>BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfamily
1, group H, member 3 protein.
Length = 447
Score = 74.5 bits (175), Expect = 3e-13
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNG-QLMKKDSIQSGANARFLVDSTFK 201
+ED+ LLK+ + + + ++ SI L ++D ++G F ++ F+
Sbjct: 283 REDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFE 341
Query: 202 FAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-DR 378
F+ MN + L DAE L +I + + DRP +++ VER+ L ++ + P DR
Sbjct: 342 FSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDR 401
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 402 LMFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 447
>BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein.
Length = 402
Score = 74.5 bits (175), Expect = 3e-13
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNG-QLMKKDSIQSGANARFLVDSTFK 201
+ED+ LLK+ + + + ++ SI L ++D ++G F ++ F+
Sbjct: 238 REDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFE 296
Query: 202 FAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-DR 378
F+ MN + L DAE L +I + + DRP +++ VER+ L ++ + P DR
Sbjct: 297 FSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDR 356
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 357 LMFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 402
>X90563-2|CAA62153.1| 475|Homo sapiens peroxisome proliferator
activated receptor gamma protein.
Length = 475
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 311 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 368
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 369 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 428
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 429 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 458
>X90563-1|CAA62152.1| 477|Homo sapiens peroxisome proliferator
activated receptor gamma protein.
Length = 477
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 313 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 370
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 371 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 430
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 431 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 460
>U79012-1|AAC51248.1| 505|Homo sapiens ligand activated
transcription factor PPARgamma2 protein.
Length = 505
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 341 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 398
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 399 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 458
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 459 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 488
>U63415-1|AAB04028.1| 505|Homo sapiens peroxisome proliferator
activated receptor gamma 2 protein.
Length = 505
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 341 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 398
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 399 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 458
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 459 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 488
>L40904-1|AAA80314.2| 477|Homo sapiens peroxisome proliferator
activated receptor gamma protein.
Length = 477
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 313 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 370
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 371 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 430
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 431 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 460
>L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator
activated receptor protein.
Length = 441
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARF--LVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG F +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ LF + +++ DRPGL N+ VE + + L+ + N PD
Sbjct: 335 AVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQY 394
Query: 385 FLRELMETLPDLRTLSTLHTEKL 453
+L++ + DLR L T H + +
Sbjct: 395 LFPKLLQKMADLRQLVTEHAQMM 417
>D83233-1|BAA18949.1| 506|Homo sapiens PPAR gamma2 protein.
Length = 506
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 342 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 399
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 400 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 459
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 460 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 489
>BT007281-1|AAP35945.1| 477|Homo sapiens peroxisome proliferative
activated receptor, gamma protein.
Length = 477
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 313 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 370
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 371 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 430
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 431 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 460
>BC006811-1|AAH06811.1| 477|Homo sapiens peroxisome
proliferator-activated receptor gamma protein.
Length = 477
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 313 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 370
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 371 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 430
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 431 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 460
>AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator
activated receptor delta protein.
Length = 441
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARF--LVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG F +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ LF + +++ DRPGL N+ VE + + L+ + N PD
Sbjct: 335 AVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQY 394
Query: 385 FLRELMETLPDLRTLSTLHTEKL 453
+L++ + DLR L T H + +
Sbjct: 395 LFPKLLQKMADLRQLVTEHAQMM 417
>AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARF--LVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG F +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ LF + +++ DRPGL N+ VE + + L+ + N PD
Sbjct: 335 AVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQY 394
Query: 385 FLRELMETLPDLRTLSTLHTEKL 453
+L++ + DLR L T H + +
Sbjct: 395 LFPKLLQKMADLRQLVTEHAQMM 417
>AY222643-1|AAO66458.1| 584|Homo sapiens CREB3L2-PPARgamma protein.
Length = 584
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 420 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 477
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 478 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 537
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 538 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 567
>AY157024-1|AAN38992.2| 475|Homo sapiens peroxisome proliferative
activated receptor gamma protein.
Length = 475
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 311 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 368
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 369 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 428
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 429 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 458
>AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARF--LVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG F +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ LF + +++ DRPGL N+ VE + + L+ + N PD
Sbjct: 335 AVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQY 394
Query: 385 FLRELMETLPDLRTLSTLHTEKL 453
+L++ + DLR L T H + +
Sbjct: 395 LFPKLLQKMADLRQLVTEHAQMM 417
>AK223528-1|BAD97248.1| 478|Homo sapiens peroxisome proliferative
activated receptor gamma isoform 2 variant protein.
Length = 478
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/150 (26%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 314 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 371
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ DRPGL N++ +E + L L+ + N P+
Sbjct: 372 AVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 431
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 432 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 461
>AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferative
activated receptor delta protein.
Length = 441
Score = 72.5 bits (170), Expect = 1e-12
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARF--LVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG F +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ LF + +++ DRPGL N+ VE + + L+ + N PD
Sbjct: 335 AVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQY 394
Query: 385 FLRELMETLPDLRTLSTLHTEKL 453
+L++ + DLR L T H + +
Sbjct: 395 LFPKLLQKMADLRQLVTEHAQMM 417
>S74349-1|AAB32649.1| 468|Homo sapiens peroxisome proliferator
activated receptor alpha protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>L02932-1|AAA36468.1| 468|Homo sapiens peroxisome proliferator
activated receptor protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>CR457435-1|CAG33716.1| 468|Homo sapiens PPARA protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>CR456547-1|CAG30433.1| 468|Homo sapiens PPARA protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>AY206718-1|AAO13489.1| 468|Homo sapiens peroxisome proliferative
activated receptor, alpha protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>AL078611-2|CAI18764.1| 468|Homo sapiens peroxisome proliferative
activated receptor, alpha protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>AL049856-1|CAI22450.1| 468|Homo sapiens peroxisome proliferative
activated receptor, alpha protein.
Length = 468
Score = 71.7 bits (168), Expect = 2e-12
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR L T H + + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLVQIIKKTE 451
>BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein.
Length = 346
Score = 71.3 bits (167), Expect = 3e-12
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 147 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 205
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 206 QLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 265
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S TE+++ + E L Q+M E P S + +A
Sbjct: 266 PKILMKITDLRSISAKGTERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTA 323
>Y07619-1|CAA68898.1| 468|Homo sapiens peroxisome
proliferator-activated receptor alpha protein.
Length = 468
Score = 70.9 bits (166), Expect = 4e-12
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 304 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 363
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
+ N++ L D++I LF + ++ DRPGL N+ +E+M + L+ + N PD
Sbjct: 364 KFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDIFLF 423
Query: 391 RELMETLPDLRTLSTLHTE-KLVVFRTE 471
+L++ + DLR L T H + ++ +TE
Sbjct: 424 PKLLQKMADLRQLVTEHAQLAQIIKKTE 451
>X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for
receptor of retinoic acid. ).
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 256 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 314
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 315 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 374
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 375 PKMLMKITDLRSISAKGAERVITLKME 401
>X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for
retinoic acid receptor. ).
Length = 432
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 226 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 284
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 285 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 344
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 345 PKMLMKITDLRSISAKGAERVITLKME 371
>U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR short form
protein.
Length = 520
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 314 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 372
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 373 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 432
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 433 PKMLMKITDLRSISAKGAERVITLKME 459
>U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR long form protein.
Length = 563
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 357 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 415
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 416 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 475
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 476 PKMLMKITDLRSISAKGAERVITLKME 502
>S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor alpha
protein.
Length = 416
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 210 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 268
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 269 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 328
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 329 PKMLMKITDLRSISAKGAERVITLKME 355
>M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein.
Length = 797
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 591 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 649
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 650 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 709
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 710 PKMLMKITDLRSISAKGAERVITLKME 736
>CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein.
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 256 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 314
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 315 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 374
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 375 PKMLMKITDLRSISAKGAERVITLKME 401
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 251 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 309
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 310 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 369
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 370 PKMLMKITDLRSISAKGAERVITLKME 396
>BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 256 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 314
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 315 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 374
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 375 PKMLMKITDLRSISAKGAERVITLKME 401
>AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor
alpha protein.
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 39/147 (26%), Positives = 73/147 (49%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 256 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAN 314
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + DAE GL +I LI DR L + V+ + L L+ + + RP RP
Sbjct: 315 QLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMF 374
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
+++ + DLR++S E+++ + E
Sbjct: 375 PKMLMKITDLRSISAKGAERVITLKME 401
>X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-epsilon protein. ).
Length = 448
Score = 70.5 bits (165), Expect = 5e-12
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 249 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 307
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 308 QLQPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 367
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S E+++ + E L Q+M E P S + +A
Sbjct: 368 PKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTA 425
>Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA
encoding a DNA-binding hormone receptor. ).
Length = 448
Score = 69.7 bits (163), Expect = 9e-12
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 249 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 307
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 308 QLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 367
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S E+++ + E L Q+M E P S + +A
Sbjct: 368 PKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMMENSEGHEPLTPSSSGNTA 425
>CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein.
Length = 336
Score = 69.3 bits (162), Expect = 1e-11
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 137 DQITLLKAACLDILILRIYTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 195
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 196 QLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 255
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S E+++ + E L Q+M E P S + +A
Sbjct: 256 PKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTA 313
>BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,
beta protein.
Length = 448
Score = 69.3 bits (162), Expect = 1e-11
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 249 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 307
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 308 QLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 367
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S E+++ + E L Q+M E P S + +A
Sbjct: 368 PKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTA 425
>AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor
beta 5 protein.
Length = 336
Score = 69.3 bits (162), Expect = 1e-11
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 137 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 195
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 196 QLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 255
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S E+++ + E L Q+M E P S + +A
Sbjct: 256 PKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTA 313
>AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor
beta 4 protein.
Length = 336
Score = 69.3 bits (162), Expect = 1e-11
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 137 DQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFTFAN 195
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L V+++ L L+ I + RP +P
Sbjct: 196 QLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMF 255
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE---HKELLRQQMWSEEEAVSPWGDSGADESA 555
+++ + DLR++S E+++ + E L Q+M E P S + +A
Sbjct: 256 PKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTA 313
>U68233-1|AAB08107.1| 472|Homo sapiens farnesol receptor HRR-1
protein.
Length = 472
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK +A+F+R +F+ L S + L+++ SG + ++ F F
Sbjct: 314 EDQIALLKGSAVEAMFLRSAEIFNKKLPSG---HSDLLEERIRNSGISDEYITPM-FSFY 369
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ + + +T E L +IV+++PDR +++ E VE++ L LQ + ++P+ P
Sbjct: 370 KSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQH 429
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR-TEHK 477
L+ L +LRT + H E L+ +R +HK
Sbjct: 430 FACLLGRLTELRTFNHHHAEMLMSWRVNDHK 460
>BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein.
Length = 476
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK +A+F+R +F+ L S + L+++ SG + ++ F F
Sbjct: 318 EDQIALLKGSAVEAMFLRSAEIFNKKLPSG---HSDLLEERIRNSGISDEYITPM-FSFY 373
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ + + +T E L +IV+++PDR +++ E VE++ L LQ + ++P+ P
Sbjct: 374 KSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQH 433
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR-TEHK 477
L+ L +LRT + H E L+ +R +HK
Sbjct: 434 FACLLGRLTELRTFNHHHAEMLMSWRVNDHK 464
>BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein.
Length = 475
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK +A+F+R +F+ L S + L+++ SG + ++ F F
Sbjct: 317 EDQIALLKGSAVEAMFLRSAEIFNKKLPSG---HSDLLEERIRNSGISDEYITPM-FSFY 372
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ + + +T E L +IV+++PDR +++ E VE++ L LQ + ++P+ P
Sbjct: 373 KSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQH 432
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR-TEHK 477
L+ L +LRT + H E L+ +R +HK
Sbjct: 433 FACLLGRLTELRTFNHHHAEMLMSWRVNDHK 463
>AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor beta
splice variant 2 protein.
Length = 486
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK +A+F+R +F+ L S + L+++ SG + ++ F F
Sbjct: 328 EDQIALLKGSAVEAMFLRSAEIFNKKLPSG---HSDLLEERIRNSGISDEYITPM-FSFY 383
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ + + +T E L +IV+++PDR +++ E VE++ L LQ + ++P+ P
Sbjct: 384 KSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQH 443
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR-TEHK 477
L+ L +LRT + H E L+ +R +HK
Sbjct: 444 FACLLGRLTELRTFNHHHAEMLMSWRVNDHK 474
>AF478445-1|AAM53550.1| 482|Homo sapiens farnesoid-X-receptor beta
splice variant 1 protein.
Length = 482
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK +A+F+R +F+ L S + L+++ SG + ++ F F
Sbjct: 324 EDQIALLKGSAVEAMFLRSAEIFNKKLPSG---HSDLLEERIRNSGISDEYITPM-FSFY 379
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ + + +T E L +IV+++PDR +++ E VE++ L LQ + ++P+ P
Sbjct: 380 KSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQH 439
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR-TEHK 477
L+ L +LRT + H E L+ +R +HK
Sbjct: 440 FACLLGRLTELRTFNHHHAEMLMSWRVNDHK 470
>AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein.
Length = 476
Score = 68.1 bits (159), Expect = 3e-11
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK +A+F+R +F+ L S + L+++ SG + ++ F F
Sbjct: 318 EDQIALLKGSAVEAMFLRSAEIFNKKLPSG---HSDLLEERIRNSGISDEYITPM-FSFY 373
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ + + +T E L +IV+++PDR +++ E VE++ L LQ + ++P+ P
Sbjct: 374 KSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQH 433
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR-TEHK 477
L+ L +LRT + H E L+ +R +HK
Sbjct: 434 FACLLGRLTELRTFNHHHAEMLMSWRVNDHK 464
>U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein.
Length = 455
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 290 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 348
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 349 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 408
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 409 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 455
>U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein.
Length = 461
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 296 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 354
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 355 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 414
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 415 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
>BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 296 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 354
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 355 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 414
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 415 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
>BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 296 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 354
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 355 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 414
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 415 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
>BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 296 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 354
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 355 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 414
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 415 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
>BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein.
Length = 387
Score = 67.7 bits (158), Expect = 4e-11
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Frame = +1
Query: 142 KKDSIQSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERM 321
++D ++G F ++ F+F+ MN + L DAE L +I + + DRP +++ VER+
Sbjct: 263 REDFAKAGLQVEF-INPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVERL 321
Query: 322 HSRLKGCLQTVIAQNRP-DRPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQ 492
L ++ + P DR F R LM+ L LRTLS++H+E++ R + K+L L
Sbjct: 322 QHTYVEALHAYVSIHHPHDRLMFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLS 380
Query: 493 QMWSEEE 513
++W E
Sbjct: 381 EIWDVHE 387
>BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 67.7 bits (158), Expect = 4e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 296 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 354
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 355 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 414
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMWSEEE 513
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W E
Sbjct: 415 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
>CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein.
Length = 461
Score = 66.5 bits (155), Expect = 8e-11
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Frame = +1
Query: 22 GQEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSI-QSGANARFLVDSTF 198
G+ED+ LLK+ + + + ++ I L KD ++G F ++ F
Sbjct: 296 GREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIF 354
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP-D 375
+F+ M + L DAE L +I + + DRP ++ VE + L + RP D
Sbjct: 355 EFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQD 414
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFRTEHKEL--LRQQMW 501
+ F R LM+ L LRTLS++H+E++ R + K+L L ++W
Sbjct: 415 QLRFPRMLMK-LVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIW 457
>M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-gamma
protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 258 DQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAG 316
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L E V+++ L L+ + RP +P
Sbjct: 317 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMF 376
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
++ + DLR +ST E+ + + E
Sbjct: 377 PRMLMKITDLRGISTKGAERAITLKME 403
>M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid
receptor-gamma-1 protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 258 DQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAG 316
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L E V+++ L L+ + RP +P
Sbjct: 317 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMF 376
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
++ + DLR +ST E+ + + E
Sbjct: 377 PRMLMKITDLRGISTKGAERAITLKME 403
>M24857-1|AAA52692.1| 454|Homo sapiens RARG protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 258 DQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAG 316
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L E V+++ L L+ + RP +P
Sbjct: 317 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMF 376
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
++ + DLR +ST E+ + + E
Sbjct: 377 PRMLMKITDLRGISTKGAERAITLKME 403
>BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 258 DQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAG 316
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L E V+++ L L+ + RP +P
Sbjct: 317 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMF 376
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
++ + DLR +ST E+ + + E
Sbjct: 377 PRMLMKITDLRGISTKGAERAITLKME 403
>BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 66.1 bits (154), Expect = 1e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 258 DQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAG 316
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L E V+++ L L+ + RP +P
Sbjct: 317 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMF 376
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
++ + DLR +ST E+ + + E
Sbjct: 377 PRMLMKITDLRGISTKGAERAITLKME 403
>AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor
protein.
Length = 381
Score = 66.1 bits (154), Expect = 1e-10
Identities = 39/147 (26%), Positives = 70/147 (47%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK+ D L +R+ + +++ +G + + + + A L D F FA
Sbjct: 185 DQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN-AGFGPLTDLVFAFAG 243
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFL 390
++ + + D E GL +I LI DR L E V+++ L L+ + RP +P
Sbjct: 244 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMF 303
Query: 391 RELMETLPDLRTLSTLHTEKLVVFRTE 471
++ + DLR +ST E+ + + E
Sbjct: 304 PRMLMKITDLRGISTKGAERAITLKME 330
>X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitamin
D-3 receptor protein.
Length = 427
Score = 64.9 bits (151), Expect = 2e-10
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDS-IQSGANARFLVDSTFKF 204
ED+ LLKS + + +R F S C N + S + ++ L++ KF
Sbjct: 257 EDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKF 316
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +NL + E L +I +++PDRPG+++ L+E + RL LQT I P PG
Sbjct: 317 QVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PG 375
Query: 385 ---FLRELMETLPDLRTLSTLHTEK 450
++++ L DLR+L+ H+++
Sbjct: 376 SHLLYAKMIQKLADLRSLNEEHSKQ 400
>J03258-1|AAA61273.1| 427|Homo sapiens VDR protein.
Length = 427
Score = 64.9 bits (151), Expect = 2e-10
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDS-IQSGANARFLVDSTFKF 204
ED+ LLKS + + +R F S C N + S + ++ L++ KF
Sbjct: 257 EDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKF 316
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +NL + E L +I +++PDRPG+++ L+E + RL LQT I P PG
Sbjct: 317 QVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PG 375
Query: 385 ---FLRELMETLPDLRTLSTLHTEK 450
++++ L DLR+L+ H+++
Sbjct: 376 SHLLYAKMIQKLADLRSLNEEHSKQ 400
>BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein.
Length = 427
Score = 64.9 bits (151), Expect = 2e-10
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDS-IQSGANARFLVDSTFKF 204
ED+ LLKS + + +R F S C N + S + ++ L++ KF
Sbjct: 257 EDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKF 316
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +NL + E L +I +++PDRPG+++ L+E + RL LQT I P PG
Sbjct: 317 QVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PG 375
Query: 385 ---FLRELMETLPDLRTLSTLHTEK 450
++++ L DLR+L+ H+++
Sbjct: 376 SHLLYAKMIQKLADLRSLNEEHSKQ 400
>AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D
(1,25-dihydroxyvitamin D3) receptor protein.
Length = 424
Score = 64.9 bits (151), Expect = 2e-10
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDS-IQSGANARFLVDSTFKF 204
ED+ LLKS + + +R F S C N + S + ++ L++ KF
Sbjct: 254 EDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKF 313
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +NL + E L +I +++PDRPG+++ L+E + RL LQT I P PG
Sbjct: 314 QVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PG 372
Query: 385 ---FLRELMETLPDLRTLSTLHTEK 450
++++ L DLR+L+ H+++
Sbjct: 373 SHLLYAKMIQKLADLRSLNEEHSKQ 397
>AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 64.9 bits (151), Expect = 2e-10
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDS-IQSGANARFLVDSTFKF 204
ED+ LLKS + + +R F S C N + S + ++ L++ KF
Sbjct: 257 EDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKF 316
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +NL + E L +I +++PDRPG+++ L+E + RL LQT I P PG
Sbjct: 317 QVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PG 375
Query: 385 ---FLRELMETLPDLRTLSTLHTEK 450
++++ L DLR+L+ H+++
Sbjct: 376 SHLLYAKMIQKLADLRSLNEEHSKQ 400
>AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 64.9 bits (151), Expect = 2e-10
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDS-IQSGANARFLVDSTFKF 204
ED+ LLKS + + +R F S C N + S + ++ L++ KF
Sbjct: 257 EDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKF 316
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +NL + E L +I +++PDRPG+++ L+E + RL LQT I P PG
Sbjct: 317 QVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PG 375
Query: 385 ---FLRELMETLPDLRTLSTLHTEK 450
++++ L DLR+L+ H+++
Sbjct: 376 SHLLYAKMIQKLADLRSLNEEHSKQ 400
>X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor
alpha 1, THRA1 protein.
Length = 410
Score = 61.7 bits (143), Expect = 2e-09
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
F +L+ + DLR + H + + + E
Sbjct: 363 FWPKLLMKVTDLRMIGACHASRFLHMKVE 391
>M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1
protein.
Length = 410
Score = 61.7 bits (143), Expect = 2e-09
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
F +L+ + DLR + H + + + E
Sbjct: 363 FWPKLLMKVTDLRMIGACHASRFLHMKVE 391
>EF614253-1|ABR09276.1| 473|Homo sapiens nuclear receptor subfamily
1, group I, member 2 protein.
Length = 473
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 309 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 366
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 367 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 426
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 427 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 457
>DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor
protein.
Length = 397
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 233 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 290
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 291 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 350
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 351 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 381
>DQ911122-1|ABJ52965.1| 434|Homo sapiens orphan nuclear receptor
protein.
Length = 434
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 270 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 327
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 328 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 387
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 388 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 418
>CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein.
Length = 410
Score = 61.7 bits (143), Expect = 2e-09
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
F +L+ + DLR + H + + + E
Sbjct: 363 FWPKLLMKVTDLRMIGACHASRFLHMKVE 391
>BC017304-1|AAH17304.2| 433|Homo sapiens NR1I2 protein protein.
Length = 433
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 269 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 326
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 327 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 386
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 387 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 417
>BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein.
Length = 410
Score = 61.7 bits (143), Expect = 2e-09
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
F +L+ + DLR + H + + + E
Sbjct: 363 FWPKLLMKVTDLRMIGACHASRFLHMKVE 391
>AY091855-1|AAM26736.1| 434|Homo sapiens steroid and xenobiotic
sensing nuclear receptor SXR protein.
Length = 434
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 270 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 327
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 328 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 387
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 388 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 418
>AJ009937-3|CAB55494.1| 342|Homo sapiens nuclear hormone receptor
PRR2-B protein.
Length = 342
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 178 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 235
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 236 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 295
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 296 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 326
>AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone receptor
PRR2-C protein.
Length = 420
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 256 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 313
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 314 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 373
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 374 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 404
>AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone receptor
PRR2-A protein.
Length = 397
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 233 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 290
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 291 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 350
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 351 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 381
>AJ009936-3|CAB55491.1| 379|Homo sapiens nuclear hormone receptor
PRR1-B protein.
Length = 379
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 215 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 272
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 273 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 332
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 333 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 363
>AJ009936-2|CAB55490.1| 457|Homo sapiens nuclear hormone receptor
PRR1-C protein.
Length = 457
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 293 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 350
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 351 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 410
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 411 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 441
>AJ009936-1|CAB55489.1| 434|Homo sapiens nuclear hormone receptor
PRR1-A protein.
Length = 434
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 270 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 327
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 328 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 387
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 388 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 418
>AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor
PXR.2 protein.
Length = 397
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 233 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 290
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 291 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 350
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 351 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 381
>AF364606-2|AAK38720.1| 434|Homo sapiens orphan nuclear receptor
PXR.1 protein.
Length = 434
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 270 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 327
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 328 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 387
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 388 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 418
>AF364606-1|AAK38722.1| 473|Homo sapiens orphan nuclear receptor
PAR2 protein.
Length = 473
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 309 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 366
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 367 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 426
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 427 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 457
>AF084645-1|AAC64558.1| 434|Homo sapiens orphan nuclear receptor
protein.
Length = 434
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 270 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 327
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 328 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 387
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 388 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 418
>AF084644-1|AAC64557.1| 473|Homo sapiens orphan nuclear receptor
protein.
Length = 473
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 309 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 366
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 367 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 426
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 427 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 457
>AF061056-1|AAD05436.1| 434|Homo sapiens orphan nuclear receptor
PXR protein.
Length = 434
Score = 61.7 bits (143), Expect = 2e-09
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK F+ +R +F+A + C G+L +G + L++ KF
Sbjct: 270 EDQISLLKGAAFELCQLRFNTVFNAETGTWEC--GRLSYCLEDTAGGFQQLLLEPMLKFH 327
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD---R 378
+ + L + E L +I L +PDRPG+ +V+++ + L++ I NRP R
Sbjct: 328 YMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHR 387
Query: 379 PGFLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
FL+ +M L +LR+++ HT++L+ + H
Sbjct: 388 FLFLK-IMAMLTELRSINAQHTQRLLRIQDIH 418
>AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone receptor,
alpha isoform 1 variant protein.
Length = 397
Score = 61.7 bits (143), Expect = 2e-09
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 232 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 289
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 290 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 349
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
F +L+ + DLR + H + + + E
Sbjct: 350 FWPKLLMKVTDLRMIGACHASRFLHMKVE 378
>X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor
alpha 1 protein.
Length = 410
Score = 60.9 bits (141), Expect = 4e-09
Identities = 32/148 (21%), Positives = 71/148 (47%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK + + +R +D P + + L+G++ K + + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKRAQLKNGGLGVVSDAIFELG 303
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P F
Sbjct: 304 KSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPHF 363
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L+ + DLR + H + + + E
Sbjct: 364 WPKLLMKVTDLRMIGACHASRFLHMKVE 391
>AB005526-1|BAA23354.1| 474|Homo sapiens peroxisome proliferator
activated-receptor gamma protein.
Length = 474
Score = 59.3 bits (137), Expect = 1e-08
Identities = 36/150 (24%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ + ++ L + + + ++ GQ M ++ ++S ++ F+F
Sbjct: 313 DQVTLLKYGVHEIIYTMLASLMNK--DGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEF 370
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
A + N++ L D+++ +F ++++++ GL N++ +E + L L+ + N P+
Sbjct: 371 AVKFNALELDDSDLAIFIAVIILSG---GLLNVKPIEDIQDNLLQALELQLKLNHPESSQ 427
Query: 385 FLRELMETLPDLRTLSTLHTEKL-VVFRTE 471
+L++ + DLR + T H + L V+ +TE
Sbjct: 428 LFAKLLQKMTDLRQIVTEHVQLLQVIKKTE 457
>U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma
protein.
Length = 463
Score = 58.4 bits (135), Expect = 2e-08
Identities = 37/146 (25%), Positives = 63/146 (43%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LL++G + L + + I+ G + + S S +
Sbjct: 296 EDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELV 355
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + +E+G +IVL PD GL N VE + ++ L+ Q P++PG
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 416 FAKLLLRLPALRSIGLKCLEHLFFFK 441
>CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein.
Length = 463
Score = 58.4 bits (135), Expect = 2e-08
Identities = 37/146 (25%), Positives = 63/146 (43%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LL++G + L + + I+ G + + S S +
Sbjct: 296 EDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELV 355
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + +E+G +IVL PD GL N VE + ++ L+ Q P++PG
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 416 FAKLLLRLPALRSIGLKCLEHLFFFK 441
>BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 58.4 bits (135), Expect = 2e-08
Identities = 37/146 (25%), Positives = 63/146 (43%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LL++G + L + + I+ G + + S S +
Sbjct: 296 EDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELV 355
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + +E+G +IVL PD GL N VE + ++ L+ Q P++PG
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 416 FAKLLLRLPALRSIGLKCLEHLFFFK 441
>AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 58.4 bits (135), Expect = 2e-08
Identities = 37/146 (25%), Positives = 63/146 (43%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LL++G + L + + I+ G + + S S +
Sbjct: 296 EDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELV 355
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + +E+G +IVL PD GL N VE + ++ L+ Q P++PG
Sbjct: 356 SKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGR 415
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 416 FAKLLLRLPALRSIGLKCLEHLFFFK 441
>U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein.
Length = 560
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 346 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 403
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 404 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 461
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 462 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 490
>CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein.
Length = 518
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 346 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 403
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 404 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 461
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 462 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 490
>BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 346 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 403
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 404 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 461
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 462 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 490
>BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 346 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 403
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 404 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 461
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 462 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 490
>AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 346 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 403
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 404 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 461
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 462 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 490
>AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan
receptor C protein.
Length = 497
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 325 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 382
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 383 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 440
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 441 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 469
>AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan
receptor C isoform a variant protein.
Length = 518
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Frame = +1
Query: 25 QEDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKF 204
Q D+ LLK+G + + VR+ ++A N + G+ + ++ L+ S F F
Sbjct: 346 QNDQIVLLKAGAMEVVLVRMCRAYNAD-NRTVFFEGKYGGMELFRA-LGCSELISSIFDF 403
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++++ ++ EI L+ ++VLI RPGL+ VE++ L+ + + R
Sbjct: 404 SHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTH--RQS 461
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTEH 474
L +L LR+L + H E+L +F+ H
Sbjct: 462 ILAKL-PPKGKLRSLCSQHVERLQIFQHLH 490
>X75918-1|CAA53518.1| 598|Homo sapiens NOT protein.
Length = 598
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 434 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 492 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 551 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 579
>M34340-1|AAA36562.2| 70|Homo sapiens putative Rev-ErbA-alpha
protein protein.
Length = 70
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +1
Query: 268 LITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTE 447
L++ DR G+ N VE++ L L+ ++ +NRP +L+ LPDLRTL+ +H+E
Sbjct: 1 LVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLLKLPDLRTLNNMHSE 60
Query: 448 KLVVFRTE 471
KL+ FR +
Sbjct: 61 KLLSFRVD 68
>BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 535
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 371 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 428
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 429 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 487
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 488 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 516
>BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 598
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 434 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 492 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 551 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 579
>AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 isoform a variant protein.
Length = 598
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 434 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 492 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 551 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 579
>AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein.
Length = 598
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 434 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 492 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 551 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 579
>AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor
NOT (Nurr1) protein.
Length = 598
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 434 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 492 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 551 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 579
>AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein.
Length = 598
Score = 56.8 bits (131), Expect = 7e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 434 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGE--WIDSIVEFSS 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 492 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 551 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 579
>S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein.
Length = 535
Score = 56.4 bits (130), Expect = 9e-08
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ L +S + +RL + +I NG ++ + G +DS +F+
Sbjct: 371 DQDLLFESAFLELFVLRLAYRSNPVEGKLIFWNGWVLHRLQCVRGFGE--WIDSIVEFSS 428
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRP--DRPG 384
+ +MN+ + ++ ++T +R GL+ + VE + +++ CL+ + N +RP
Sbjct: 429 NLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPN 487
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
+L +L+ LP+LRTL T +++ + E
Sbjct: 488 YLSKLLGKLPELRTLCTQGLQRIFYLKLE 516
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 56.0 bits (129), Expect = 1e-07
Identities = 36/146 (24%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L A + I+ G + ++S S +
Sbjct: 295 DDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 354
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +IVL PD GL N VE + ++ L+ P++PG
Sbjct: 355 SKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGR 414
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 415 FAKLLLRLPALRSIGLKCLEHLFFFK 440
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 56.0 bits (129), Expect = 1e-07
Identities = 36/146 (24%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L A + I+ G + ++S S +
Sbjct: 285 DDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 344
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +IVL PD GL N VE + ++ L+ P++PG
Sbjct: 345 SKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGR 404
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 405 FAKLLLRLPALRSIGLKCLEHLFFFK 430
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 56.0 bits (129), Expect = 1e-07
Identities = 36/146 (24%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L A + I+ G + ++S S +
Sbjct: 295 DDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 354
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +IVL PD GL N VE + ++ L+ P++PG
Sbjct: 355 SKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGR 414
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 415 FAKLLLRLPALRSIGLKCLEHLFFFK 440
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 56.0 bits (129), Expect = 1e-07
Identities = 36/146 (24%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L A + I+ G + ++S S +
Sbjct: 349 DDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 408
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +IVL PD GL N VE + ++ L+ P++PG
Sbjct: 409 SKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGR 468
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 469 FAKLLLRLPALRSIGLKCLEHLFFFK 494
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 56.0 bits (129), Expect = 1e-07
Identities = 36/146 (24%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L A + I+ G + ++S S +
Sbjct: 295 DDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 354
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +IVL PD GL N VE + ++ L+ P++PG
Sbjct: 355 SKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGR 414
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 415 FAKLLLRLPALRSIGLKCLEHLFFFK 440
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 56.0 bits (129), Expect = 1e-07
Identities = 36/146 (24%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L A + I+ G + ++S S +
Sbjct: 295 DDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 354
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +IVL PD GL N VE + ++ L+ P++PG
Sbjct: 355 SKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGR 414
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 415 FAKLLLRLPALRSIGLKCLEHLFFFK 440
>BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein.
Length = 451
Score = 54.4 bits (125), Expect = 4e-07
Identities = 31/135 (22%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELMETLPDLRTL 429
F +L+ P +R L
Sbjct: 363 FWPKLLMKGPQVRQL 377
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 315 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 374
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 375 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 434
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 435 FAKLLLRLPALRSIGLKCLEHLFFFK 460
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 53.6 bits (123), Expect = 6e-07
Identities = 35/146 (23%), Positives = 62/146 (42%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
+D+ LL++G + L + I+ G + ++S S +
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELV 425
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+M M + E+G +I+L PD GL N VE + ++ L+T Q P++ G
Sbjct: 426 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 485
Query: 388 LRELMETLPDLRTLSTLHTEKLVVFR 465
+L+ LP LR++ E L F+
Sbjct: 486 FAKLLLRLPALRSIGLKCLEHLFFFK 511
>AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ16818 fis, clone TRACH1000193, highly similar
to Orphan nuclear receptor HMR. ).
Length = 652
Score = 53.2 bits (122), Expect = 8e-07
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ LL+S + +RL +I +G ++ + G R +DS F+
Sbjct: 488 DQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFGDR--IDSILAFSR 545
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQ--NRPDRPG 384
++S+ + ++VLIT DR GL+ VE + +R+ CL+ +A P
Sbjct: 546 SLHSLLVDVPAFACLSALVLIT-DRHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQPAS 604
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
L L+ LP+LRTL T +++ + E
Sbjct: 605 CLSRLLGKLPELRTLCTQGLQRIFYLKLE 633
>M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid
receptor (TR2-11) mRNA, complete cds. ).
Length = 603
Score = 52.4 bits (120), Expect = 1e-06
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Frame = +1
Query: 121 CLNGQLMKKDSIQSGANARFLVDSTFKFAERMNSMN---LTDAEIGLFCSIVLITPDRPG 291
CL+ L ++D + S + L++ FK E NSM + E +IVL +PD P
Sbjct: 457 CLHNSL-QQDKM-STERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPS 514
Query: 292 LRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N+EL+E+ + Q I + PD L L+ LP LR ++ TE+L
Sbjct: 515 LENMELIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEEL 568
>X65463-1|CAA46456.1| 231|Homo sapiens MHC class I promoter binding
protein protein.
Length = 231
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQS-GANARF---LVDST 195
+D+ LL++G + L + I+ G + ++S S G A F L
Sbjct: 60 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVL 119
Query: 196 FKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD 375
+ +M M + E+G +I+L PD GL N VE + ++ L+T Q P+
Sbjct: 120 TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE 179
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFR 465
+ G +L+ LP LR++ E L F+
Sbjct: 180 QQGRFAKLLLRLPALRSIGLKCLEHLFFFK 209
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQS-GANARF---LVDST 195
+D+ LL++G + L + I+ G + ++S S G A F L
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVL 425
Query: 196 FKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD 375
+ +M M + E+G +I+L PD GL N VE + ++ L+T Q P+
Sbjct: 426 TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE 485
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFR 465
+ G +L+ LP LR++ E L F+
Sbjct: 486 QQGRFAKLLLRLPALRSIGLKCLEHLFFFK 515
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQS-GANARF---LVDST 195
+D+ LL++G + L + I+ G + ++S S G A F L
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVL 425
Query: 196 FKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD 375
+ +M M + E+G +I+L PD GL N VE + ++ L+T Q P+
Sbjct: 426 TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE 485
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFR 465
+ G +L+ LP LR++ E L F+
Sbjct: 486 QQGRFAKLLLRLPALRSIGLKCLEHLFFFK 515
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQS-GANARF---LVDST 195
+D+ LL++G + L + I+ G + ++S S G A F L
Sbjct: 366 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVL 425
Query: 196 FKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD 375
+ +M M + E+G +I+L PD GL N VE + ++ L+T Q P+
Sbjct: 426 TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE 485
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFR 465
+ G +L+ LP LR++ E L F+
Sbjct: 486 QQGRFAKLLLRLPALRSIGLKCLEHLFFFK 515
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQS-GANARF---LVDST 195
+D+ LL++G + L + I+ G + ++S S G A F L
Sbjct: 406 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVL 465
Query: 196 FKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPD 375
+ +M M + E+G +I+L PD GL N VE + ++ L+T Q P+
Sbjct: 466 TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE 525
Query: 376 RPGFLRELMETLPDLRTLSTLHTEKLVVFR 465
+ G +L+ LP LR++ E L F+
Sbjct: 526 QQGRFAKLLLRLPALRSIGLKCLEHLFFFK 555
>L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ LL+S + +RL +I +G ++ + +Q +DS F+
Sbjct: 434 DQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQCARGFGDWIDSILAFSR 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQ--NRPDRPG 384
++S+ + ++VLIT DR GL+ VE + +R+ CL+ +A P
Sbjct: 492 SLHSLLVDVPAFACLSALVLIT-DRHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQPAS 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
L L+ LP+LRTL T +++ + E
Sbjct: 551 CLSRLLGKLPELRTLCTQGLQRIFYLKLE 579
>D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ LL+S + +RL +I +G ++ + +Q +DS F+
Sbjct: 434 DQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQCARGFGDWIDSILAFSR 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQ--NRPDRPG 384
++S+ + ++VLIT DR GL+ VE + +R+ CL+ +A P
Sbjct: 492 SLHSLLVDVPAFACLSALVLIT-DRHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQPAS 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
L L+ LP+LRTL T +++ + E
Sbjct: 551 CLSRLLGKLPELRTLCTQGLQRIFYLKLE 579
>CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ LL+S + +RL +I +G ++ + +Q +DS F+
Sbjct: 434 DQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQCARGFGDWIDSILAFSR 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQ--NRPDRPG 384
++S+ + ++VLIT DR GL+ VE + +R+ CL+ +A P
Sbjct: 492 SLHSLLVDVPAFACLSALVLIT-DRHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQPAS 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
L L+ LP+LRTL T +++ + E
Sbjct: 551 CLSRLLGKLPELRTLCTQGLQRIFYLKLE 579
>BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ LL+S + +RL +I +G ++ + +Q +DS F+
Sbjct: 434 DQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQCARGFGDWIDSILAFSR 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQ--NRPDRPG 384
++S+ + ++VLIT DR GL+ VE + +R+ CL+ +A P
Sbjct: 492 SLHSLLVDVPAFACLSALVLIT-DRHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQPAS 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
L L+ LP+LRTL T +++ + E
Sbjct: 551 CLSRLLGKLPELRTLCTQGLQRIFYLKLE 579
>BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ LL+S + +RL +I +G ++ + +Q +DS F+
Sbjct: 434 DQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHR--LQCARGFGDWIDSILAFSR 491
Query: 211 RMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQ--NRPDRPG 384
++S+ + ++VLIT DR GL+ VE + +R+ CL+ +A P
Sbjct: 492 SLHSLLVDVPAFACLSALVLIT-DRHGLQEPRRVEELQNRIASCLKEHVAAVAGEPQPAS 550
Query: 385 FLRELMETLPDLRTLSTLHTEKLVVFRTE 471
L L+ LP+LRTL T +++ + E
Sbjct: 551 CLSRLLGKLPELRTLCTQGLQRIFYLKLE 579
>Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA for
thyroid hormone receptor. ).
Length = 490
Score = 50.8 bits (116), Expect = 4e-06
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELM 402
F +L+
Sbjct: 363 FWPKLL 368
>M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor
protein.
Length = 490
Score = 50.8 bits (116), Expect = 4e-06
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELM 402
F +L+
Sbjct: 363 FWPKLL 368
>J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor
protein.
Length = 490
Score = 50.8 bits (116), Expect = 4e-06
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELM 402
F +L+
Sbjct: 363 FWPKLL 368
>BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 50.8 bits (116), Expect = 4e-06
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELM 402
F +L+
Sbjct: 363 FWPKLL 368
>BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 50.8 bits (116), Expect = 4e-06
Identities = 28/126 (22%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL-MKKDSIQSGANARFLVDSTFKF 204
ED+ LLK + + +R +D P + + L+G++ +K++ +++G + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFEL 302
Query: 205 AERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG 384
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P
Sbjct: 303 GKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPH 362
Query: 385 FLRELM 402
F +L+
Sbjct: 363 FWPKLL 368
>Z30425-1|CAA83016.1| 348|Homo sapiens orphan nuclear hormone
receptor protein.
Length = 348
Score = 50.4 bits (115), Expect = 6e-06
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK + + L F + +C + +D + G FL + F F
Sbjct: 188 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVGFQVEFL-ELLFHFH 246
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI-AQNRPDRPG 384
+ + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q R R
Sbjct: 247 GTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDR 306
Query: 385 FL-RELMETLPDLRTLS 432
FL +L+ L +LR+++
Sbjct: 307 FLYAKLLGLLAELRSIN 323
>AY572827-1|AAT47180.1| 319|Homo sapiens constitutive androstane
receptor SV22 protein.
Length = 319
Score = 50.4 bits (115), Expect = 6e-06
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK + + L F + +C + +D + G FL + F F
Sbjct: 159 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVGFQVEFL-ELLFHFH 217
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI-AQNRPDRPG 384
+ + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q R R
Sbjct: 218 GTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDR 277
Query: 385 FL-RELMETLPDLRTLS 432
FL +L+ L +LR+++
Sbjct: 278 FLYAKLLGLLAELRSIN 294
>AL590714-14|CAH72154.1| 348|Homo sapiens nuclear receptor
subfamily 1, group I, member 3 protein.
Length = 348
Score = 50.4 bits (115), Expect = 6e-06
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK + + L F + +C + +D + G FL + F F
Sbjct: 188 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVGFQVEFL-ELLFHFH 246
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI-AQNRPDRPG 384
+ + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q R R
Sbjct: 247 GTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDR 306
Query: 385 FL-RELMETLPDLRTLS 432
FL +L+ L +LR+++
Sbjct: 307 FLYAKLLGLLAELRSIN 323
>X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor
alpha 2 protein.
Length = 490
Score = 50.0 bits (114), Expect = 8e-06
Identities = 27/125 (21%), Positives = 61/125 (48%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ LLK + + +R +D P + + L+G++ K + + D+ F+
Sbjct: 245 EDQIILLKGCCMEIMSLRAAVRYD-PESDTLTLSGEMAVKRAQLKNGGLGVVSDAIFELG 303
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGF 387
+ +++ NL D E+ L +++L++ DR GL ++ +E+ + + + + P F
Sbjct: 304 KSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPHF 363
Query: 388 LRELM 402
+L+
Sbjct: 364 WPKLL 368
>BC069626-1|AAH69626.1| 352|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 352
Score = 45.2 bits (102), Expect = 2e-04
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDST---F 198
ED+ +LLK + + L F + +C + +D + F V+ F
Sbjct: 188 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLF 247
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI-AQNRPD 375
F + + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q R
Sbjct: 248 HFHGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRP 307
Query: 376 RPGFL-RELMETLPDLRTLS 432
R FL +L+ L +LR+++
Sbjct: 308 RDRFLYAKLLGLLAELRSIN 327
>AY572818-1|AAT47171.1| 288|Homo sapiens constitutive androstane
receptor SV13 protein.
Length = 288
Score = 45.2 bits (102), Expect = 2e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFA 207
ED+ +LLK + + L F + +C + +D + G FL + F F
Sbjct: 159 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVGFQVEFL-ELLFHFH 217
Query: 208 ERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI--AQNRP-DR 378
+ + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q RP DR
Sbjct: 218 GTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDR 277
Query: 379 -PG 384
PG
Sbjct: 278 SPG 280
>AL590714-13|CAH72153.1| 352|Homo sapiens nuclear receptor
subfamily 1, group I, member 3 protein.
Length = 352
Score = 45.2 bits (102), Expect = 2e-04
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDST---F 198
ED+ +LLK + + L F + +C + +D + F V+ F
Sbjct: 188 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLF 247
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI-AQNRPD 375
F + + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q R
Sbjct: 248 HFHGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRP 307
Query: 376 RPGFL-RELMETLPDLRTLS 432
R FL +L+ L +LR+++
Sbjct: 308 RDRFLYAKLLGLLAELRSIN 327
>U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein.
Length = 596
Score = 43.2 bits (97), Expect = 9e-04
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 160 SGANARFLVDSTFKFAERMNSMNLTDA---EIGLFCSIVLITPDRPGLRNIELVERMHSR 330
SG + +++ +K E NSM D E +IVL +PD PGL + +E+ +
Sbjct: 461 SGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQEK 520
Query: 331 LKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
+ LQ + + + L ++ LP LR +S+ TE+L
Sbjct: 521 AQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 561
>L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein.
Length = 615
Score = 42.7 bits (96), Expect = 0.001
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 160 SGANARFLVDSTFKFAERMNSM---NLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSR 330
SG + +++ +K E NSM ++ E +IVL +PD PGL + +E+ +
Sbjct: 480 SGDRIKQVMEHIWKLQEFCNSMANWDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQEK 539
Query: 331 LKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
+ LQ + + + L ++ LP LR +S+ TE+L
Sbjct: 540 AQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 580
>AY572819-1|AAT47172.1| 321|Homo sapiens constitutive androstane
receptor SV14 protein.
Length = 321
Score = 39.9 bits (89), Expect = 0.008
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = +1
Query: 28 EDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDST---F 198
ED+ +LLK + + L F + +C + +D + F V+ F
Sbjct: 188 EDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLF 247
Query: 199 KFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVI--AQNRP 372
F + + L + E L ++ L +PDRPG+ + ++++ + LQ+ I Q RP
Sbjct: 248 HFHGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRP 307
Query: 373 -DR-PG 384
DR PG
Sbjct: 308 RDRSPG 313
>U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein
transcription factor protein.
Length = 500
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 361 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 420
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 421 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 476
>U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription
factor protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 356 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 415
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 416 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 471
>BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 356 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 415
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 416 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 471
>BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 356 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 415
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 416 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 471
>AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcription
factor B1F protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 356 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 415
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 416 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 471
>AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcription
factor isoform B1F-2 protein.
Length = 541
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 402 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 461
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 462 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 517
>AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding
factor protein.
Length = 495
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 356 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 415
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 416 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 471
>AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcription
factor hB1F-2 protein.
Length = 541
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 402 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 461
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 462 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 517
>AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein
protein.
Length = 541
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +1
Query: 112 SIICLNGQLMKKDSI--QSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDR 285
SI + GQ + I Q+GA L+ + ++ S+ E +VL + D
Sbjct: 402 SIFLVTGQQVDYSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDV 461
Query: 286 PGLRNIELVERMHSRLKGCLQTVIAQNRPDRPGFLRELMETLPDLRTLSTLHTEKL 453
L N +LVE + ++ L N P + +L+ LP++R +S E L
Sbjct: 462 KNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 517
>BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 37.5 bits (83), Expect = 0.043
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG + ++ ++S +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLI 273
A + N++ L D+++ LF + +++
Sbjct: 335 AVKFNALELDDSDLALFIAAIIL 357
>BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 37.5 bits (83), Expect = 0.043
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG + ++ ++S +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLI 273
A + N++ L D+++ LF + +++
Sbjct: 335 AVKFNALELDDSDLALFIAAIIL 357
>AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 361
Score = 37.5 bits (83), Expect = 0.043
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQ-LMKKDSIQSGANA-RFLVDSTFKF 204
D+ TLLK G+ +A+F L + + + ++ NG + ++ ++S +++ F+F
Sbjct: 277 DQVTLLKYGVHEAIFAMLASIVNK--DGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEF 334
Query: 205 AERMNSMNLTDAEIGLFCSIVLI 273
A + N++ L D+++ LF + +++
Sbjct: 335 AVKFNALELDDSDLALFIAAIIL 357
>AY827087-1|AAV85448.1| 85|Homo sapiens vitamin D receptor
protein.
Length = 85
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 283 RPGLRNIELVERMHSRLKGCLQTVIAQNRPDRPG---FLRELMETLPDLRTLSTLHTEK 450
RPG+++ L+E + RL LQT I P PG ++++ L DLR+L+ H+++
Sbjct: 1 RPGVQDAALIEAIQDRLSNTLQTYIRCRHPP-PGSHLLYAKMIQKLADLRSLNEEHSKQ 58
>Y16186-1|CAA76112.1| 157|Homo sapiens peroxisome
proliferator-activated receptor alpha protein.
Length = 157
Score = 35.1 bits (77), Expect = 0.23
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +1
Query: 31 DKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKKDSIQSGANARFLVDSTFKFAE 210
D+ TLLK G+++A+F L + + + NG + ++ +++ F FA
Sbjct: 80 DQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFDFAM 139
Query: 211 RMNSMNLTDAEIGLF 255
+ N++ L D++I LF
Sbjct: 140 KFNALELDDSDISLF 154
>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 338 PFRRECIRSTSSILRRPGRSGVMSTMEQKRPISASVKFIEFMRSANLKVEST--RNLAFA 165
P RR+CIR ++ + P + M+++E K + + + +AN ST RN+
Sbjct: 469 PLRRQCIRENGNVAKTPRNTYKMTSLETKTS-DTETEPSKTVSTANRSGRSTEFRNIQKL 527
Query: 164 PLWIESFFISCPLRQIILLRG 102
P+ +S + + + IL RG
Sbjct: 528 PVESKSEETNTEIVECILKRG 548
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 338 PFRRECIRSTSSILRRPGRSGVMSTMEQKRPISASVKFIEFMRSANLKVEST--RNLAFA 165
P RR+CIR ++ + P + M+++E K + + + +AN ST RN+
Sbjct: 829 PLRRQCIRENGNVAKTPRNTYKMTSLETKTS-DTETEPSKTVSTANRSGRSTEFRNIQKL 887
Query: 164 PLWIESFFISCPLRQIILLRG 102
P+ +S + + + IL RG
Sbjct: 888 PVESKSEETNTEIVECILKRG 908
>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 338 PFRRECIRSTSSILRRPGRSGVMSTMEQKRPISASVKFIEFMRSANLKVEST--RNLAFA 165
P RR+CIR ++ + P + M+++E K + + + +AN ST RN+
Sbjct: 469 PLRRQCIRENGNVAKTPRNTYKMTSLETKTS-DTETEPSKTVSTANRSGRSTEFRNIQKL 527
Query: 164 PLWIESFFISCPLRQIILLRG 102
P+ +S + + + IL RG
Sbjct: 528 PVESKSEETNTEIVECILKRG 548
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 338 PFRRECIRSTSSILRRPGRSGVMSTMEQKRPISASVKFIEFMRSANLKVEST--RNLAFA 165
P RR+CIR ++ + P + M+++E K + + + +AN ST RN+
Sbjct: 829 PLRRQCIRENGNVAKTPRNTYKMTSLETKTS-DTETEPSKTVSTANRSGRSTEFRNIQKL 887
Query: 164 PLWIESFFISCPLRQIILLRG 102
P+ +S + + + IL RG
Sbjct: 888 PVESKSEETNTEIVECILKRG 908
>X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR2. ).
Length = 433
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +1
Query: 181 LVDSTFKFAERMNSMNLTDAEIGLFCSIVLITPDRPGLRNIELVERMHSRLKGCLQTVIA 360
L + + R + + E + ++ L D + N+E V+++ L LQ
Sbjct: 320 LYRAILQLVRRYKKLKVEKEEFVMLKALALANSDSMYIENLEAVQKLQDLLHEALQDYEL 379
Query: 361 QNRPDRPGFLRELMETLPDLR 423
R + P +L+ TLP LR
Sbjct: 380 SQRHEEPRRAGKLLLTLPLLR 400
>BC058929-1|AAH58929.1| 174|Homo sapiens ubiquitin-like 4B protein.
Length = 174
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 418 LRTLSTLHTEKLVVFRTEHKELLRQQMWSEEEAVSPWGDSGADESAR 558
L+ L H E+L EH E L Q + +EE V P G+ + AR
Sbjct: 111 LQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEPAGERELEAKAR 157
>AK098556-1|BAC05331.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ25690 fis, clone TST04424. ).
Length = 174
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 418 LRTLSTLHTEKLVVFRTEHKELLRQQMWSEEEAVSPWGDSGADESAR 558
L+ L H E+L EH E L Q + +EE V P G+ + AR
Sbjct: 111 LQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEPAGERELEAKAR 157
>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 2896
Score = 29.9 bits (64), Expect = 8.7
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -2
Query: 338 PFRRECIRSTSSILRRPGRSGVMSTMEQKRPISASVKFIEFMRSANLKVEST--RNLAFA 165
P RR+CIR ++ + P + M+++E K + + + + N ST RN+
Sbjct: 469 PLRRQCIRENGNVAKTPRNTYKMTSLETKTS-DTETEPSKTVSTVNRSGRSTEFRNIQKL 527
Query: 164 PLWIESFFISCPLRQIILLRG 102
P+ +S + + + IL RG
Sbjct: 528 PVESKSEETNTEIVECILKRG 548
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 29.9 bits (64), Expect = 8.7
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -2
Query: 338 PFRRECIRSTSSILRRPGRSGVMSTMEQKRPISASVKFIEFMRSANLKVEST--RNLAFA 165
P RR+CIR ++ + P + M+++E K + + + + N ST RN+
Sbjct: 829 PLRRQCIRENGNVAKTPRNTYKMTSLETKTS-DTETEPSKTVSTVNRSGRSTEFRNIQKL 887
Query: 164 PLWIESFFISCPLRQIILLRG 102
P+ +S + + + IL RG
Sbjct: 888 PVESKSEETNTEIVECILKRG 908
>BT009771-1|AAP88773.1| 614|Homo sapiens histone deacetylase 7A
protein.
Length = 614
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 538 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 592
>BC064840-1|AAH64840.1| 954|Homo sapiens HDAC7A protein protein.
Length = 954
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 878 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 932
>BC020505-1|AAH20505.2| 711|Homo sapiens HDAC7A protein protein.
Length = 711
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 635 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 689
>BC006453-1|AAH06453.1| 276|Homo sapiens HDAC7A protein protein.
Length = 276
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 200 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 254
>AY358336-1|AAQ88702.1| 509|Homo sapiens DFLL295 protein.
Length = 509
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = -2
Query: 614 PQSPAFSLDSLL---DTDPIGLRADSSA---PESPQGDTASSSLHICCRNNSLCS-VRKT 456
P+ P L ++ T P G+ D+ P+ P+GD S +H C ++ LC +R+
Sbjct: 347 PERPTTGLTTIAPAASTPPGGITVDNRVQTDPQKPRGDVFSVLVHSCNFDHGLCGWIREK 406
Query: 455 TSFSVCSVLRVRKSGK-VSINSLKNPG 378
+ +R G+ +++++ K PG
Sbjct: 407 DNDLHWEPIRDPAGGQYLTVSAAKAPG 433
>AY321367-1|AAP84704.1| 915|Homo sapiens histone deacetylase 7A
variant 3 protein.
Length = 915
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 839 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 893
>AY302468-1|AAQ18232.1| 991|Homo sapiens histone deacetylase protein.
Length = 991
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 915 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 969
>AL117455-1|CAB55935.1| 878|Homo sapiens hypothetical protein
protein.
Length = 878
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 802 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 856
>AK027781-1|BAB55363.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ14875 fis, clone PLACE1002816, weakly similar to
HISTONE DEACETYLASE HDA1. ).
Length = 184
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 108 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 162
>AK024469-1|BAB15759.1| 484|Homo sapiens FLJ00062 protein protein.
Length = 484
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 408 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 462
>AK001190-1|BAA91545.1| 614|Homo sapiens protein ( Homo sapiens
cDNA FLJ10328 fis, clone NT2RM2000588, weakly similar to
HISTONE DEACETYLASE HDA1. ).
Length = 614
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 538 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 592
>AK001032-1|BAA91474.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ10170 fis, clone HEMBA1003690, weakly similar to
HISTONE DEACETYLASE HDA1. ).
Length = 276
Score = 29.9 bits (64), Expect = 8.7
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 PDRPGLRNIELVERMHSRLKGCLQTVIA---QNRPDRPGFLRELMETLPDLRTLS 432
P+ +R++E V R+HS+ GC+Q + + P PG +E +E + L +LS
Sbjct: 200 PNLNAIRSLEAVIRVHSKYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLS 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,126,475
Number of Sequences: 237096
Number of extensions: 2143962
Number of successful extensions: 4413
Number of sequences better than 10.0: 219
Number of HSP's better than 10.0 without gapping: 4232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4346
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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