Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_F11
(147 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2 ... 33 0.12
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-... 33 0.12
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-... 33 0.12
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-... 33 0.12
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-... 33 0.12
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein. 33 0.12
BX640692-1|CAE45816.1| 237|Homo sapiens hypothetical protein pr... 31 0.86
BC023546-1|AAH23546.1| 897|Homo sapiens DKFZP686A01247 protein ... 31 0.86
AB029025-1|BAA83054.2| 1101|Homo sapiens KIAA1102 protein protein. 31 0.86
BC031621-1|AAH31621.1| 401|Homo sapiens Rab interacting lysosom... 29 3.5
BC004961-1|AAH04961.1| 348|Homo sapiens RILP protein protein. 29 3.5
AK055755-1|BAB71003.1| 401|Homo sapiens protein ( Homo sapiens ... 29 3.5
AJ404317-1|CAC33443.1| 401|Homo sapiens rab interacting lysosom... 29 3.5
AJ278711-1|CAC82174.1| 401|Homo sapiens hypothetical protein pr... 29 3.5
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 28 4.6
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 28 4.6
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 27 8.0
BC112391-1|AAI12392.1| 957|Homo sapiens ELKS/RAB6-interacting/C... 27 8.0
BC111550-1|AAI11551.1| 957|Homo sapiens ERC2 protein protein. 27 8.0
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 27 8.0
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 27 8.0
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 27 8.0
AB002376-1|BAA20832.2| 970|Homo sapiens KIAA0378 protein. 27 8.0
>DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2
protein.
Length = 1313
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 20 ELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARR 136
EL +AQR +E R Q ALN QL + + + A ++AR+
Sbjct: 820 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQ 858
>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 20 ELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARR 136
EL +AQR +E R Q ALN QL + + + A ++AR+
Sbjct: 1398 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQ 1436
>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 20 ELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARR 136
EL +AQR +E R Q ALN QL + + + A ++AR+
Sbjct: 1517 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQ 1555
>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 20 ELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARR 136
EL +AQR +E R Q ALN QL + + + A ++AR+
Sbjct: 1398 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQ 1436
>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 20 ELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARR 136
EL +AQR +E R Q ALN QL + + + A ++AR+
Sbjct: 1517 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQ 1555
>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
Length = 1919
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 20 ELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARR 136
EL +AQR +E R Q ALN QL + + + A ++AR+
Sbjct: 1419 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQ 1457
>BX640692-1|CAE45816.1| 237|Homo sapiens hypothetical protein
protein.
Length = 237
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQR-DQLQALNDQLRTYQDKNNEAVA--KARRDTI 145
+R E EAA + ++ R +QLQ +N+QLR DK + +A K+RR ++
Sbjct: 142 MRCEEEAAVQPHSRARQEQLQLINNQLREEDDKWQDDLARWKSRRRSV 189
>BC023546-1|AAH23546.1| 897|Homo sapiens DKFZP686A01247 protein
protein.
Length = 897
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQR-DQLQALNDQLRTYQDKNNEAVA--KARRDTI 145
+R E EAA + ++ R +QLQ +N+QLR DK + +A K+RR ++
Sbjct: 172 MRCEEEAAVQPHSRARQEQLQLINNQLREEDDKWQDDLARWKSRRRSV 219
>AB029025-1|BAA83054.2| 1101|Homo sapiens KIAA1102 protein protein.
Length = 1101
Score = 30.7 bits (66), Expect = 0.86
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQR-DQLQALNDQLRTYQDKNNEAVA--KARRDTI 145
+R E EAA + ++ R +QLQ +N+QLR DK + +A K+RR ++
Sbjct: 349 MRCEEEAAVQPHSRARQEQLQLINNQLREEDDKWQDDLARWKSRRRSV 396
>BC031621-1|AAH31621.1| 401|Homo sapiens Rab interacting lysosomal
protein protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 TMALRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNE 115
T AL+ +L+ N E R +L A+ QLR QD+ E
Sbjct: 141 TEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERE 178
>BC004961-1|AAH04961.1| 348|Homo sapiens RILP protein protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 TMALRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNE 115
T AL+ +L+ N E R +L A+ QLR QD+ E
Sbjct: 88 TEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERE 125
>AK055755-1|BAB71003.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ31193 fis, clone KIDNE2000497, weakly similar to
TRICHOHYALIN. ).
Length = 401
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 TMALRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNE 115
T AL+ +L+ N E R +L A+ QLR QD+ E
Sbjct: 141 TEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERE 178
>AJ404317-1|CAC33443.1| 401|Homo sapiens rab interacting lysosomal
protein protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 TMALRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNE 115
T AL+ +L+ N E R +L A+ QLR QD+ E
Sbjct: 141 TEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERE 178
>AJ278711-1|CAC82174.1| 401|Homo sapiens hypothetical protein
protein.
Length = 401
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 TMALRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNE 115
T AL+ +L+ N E R +L A+ QLR QD+ E
Sbjct: 141 TEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERE 178
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARRD 139
L E+E R N E + + DQL Q++ + ++K ++D
Sbjct: 493 LIAEIEELDRQNQEATKHMILIKDQLSKQQNEGDSIISKLKQD 535
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKARRD 139
L E+E R N E + + DQL Q++ + ++K ++D
Sbjct: 208 LIAEIEELDRQNQEATKHMILIKDQLSKQQNEGDSIISKLKQD 250
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 32 AQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKAR 133
A ++ +++QLQALND+ Y DK + A R
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNR 123
>BC112391-1|AAI12392.1| 957|Homo sapiens ELKS/RAB6-interacting/CAST
family member 2 protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNN 112
L+ ++ + N + +QAL D+LRT +D N+
Sbjct: 207 LKEQMRVSHEENQHLQLTIQALQDELRTQRDLNH 240
>BC111550-1|AAI11551.1| 957|Homo sapiens ERC2 protein protein.
Length = 957
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNN 112
L+ ++ + N + +QAL D+LRT +D N+
Sbjct: 207 LKEQMRVSHEENQHLQLTIQALQDELRTQRDLNH 240
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 32 AQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKAR 133
A ++ +++QLQALND+ Y DK + A R
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNR 123
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 32 AQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKAR 133
A ++ +++QLQALND+ Y DK + A R
Sbjct: 90 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNR 123
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 32 AQRSNNEQRDQLQALNDQLRTYQDKNNEAVAKAR 133
A ++ +++QLQALND+ Y DK + A R
Sbjct: 98 AVATSRSEKEQLQALNDRFAGYIDKVRQLEAHNR 131
>AB002376-1|BAA20832.2| 970|Homo sapiens KIAA0378 protein.
Length = 970
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 11 LRTELEAAQRSNNEQRDQLQALNDQLRTYQDKNN 112
L+ ++ + N + +QAL D+LRT +D N+
Sbjct: 220 LKEQMRVSHEENQHLQLTIQALQDELRTQRDLNH 253
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,691,237
Number of Sequences: 237096
Number of extensions: 99427
Number of successful extensions: 695
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 76,859,062
effective HSP length: 29
effective length of database: 69,983,278
effective search space used: 1329682282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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