Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F10
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   2.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   3.8  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    22   6.7  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    22   8.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   8.9  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 184 FTYCVEYTFIDRHYLACTLHIICTYILYFV 273
           FT CV + F     L    ++ C   +YF+
Sbjct: 225 FTQCVTFGFFATPGLETAYNLFCVIAMYFL 254


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 374 SQFLESVHLLYVLFRKSLIRYR--S*SVTRKHFCAYTKY 264
           S F++    L V  R+ L  YR     +T +H+C+ TKY
Sbjct: 75  SFFVDESGWLLVRNREGLQFYRMEGSDLTLRHYCSETKY 113


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/48 (20%), Positives = 21/48 (43%)
 Frame = +1

Query: 49  CIILFIYICYSFHIHNNFYWFLVLSHLFTVDQ*IQRLFSVTFVIRFTY 192
           C ++ +++ +      + Y       LFT    +    SV +V+ FT+
Sbjct: 87  CYLVGLFVTWLSFFQVHIYTREPYCQLFTYTSGVSSFLSVWYVVAFTF 134


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 103 YWFLVLSHLFTVDQ*IQRLFSVTFVIRFTYCVEYTFIDRHY 225
           YW  +++H + V +     + V ++ R TY     ++ R Y
Sbjct: 65  YWTGIVTHGYLVIRPKDHNYVVAYIDRPTYAAFNEYLPRGY 105


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 103 YWFLVLSHLFTVDQ*IQRLFSVTFVIRFTYCVEYTFIDRHY 225
           YW  +++H + V +     + V ++ R TY     ++ R Y
Sbjct: 65  YWTGIVTHGYLVIRPKDHNYVVAYIDRPTYAAFNEYLPRGY 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,683
Number of Sequences: 2352
Number of extensions: 7243
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)