Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F09
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.4  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   3.3  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.6  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 291 CSAFSRSVAYHTYSGPPAAHEITSAP 214
           CS    S+  + +  PP+ H  +SAP
Sbjct: 500 CSGEVASLTEYHHVAPPSGHHASSAP 525


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 445 LAARGQVRGGVRDARPRPLVR 383
           L   GQV  G    RP+PL++
Sbjct: 18  LGPAGQVLAGSSSPRPKPLLK 38


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 136 VAPPEAAGQLARSGHEQRQVDEQQHADG 53
           VAP E    L +  H  +Q+ E+Q   G
Sbjct: 28  VAPIERVKLLLQVQHISKQISEEQRYKG 55


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 136 VAPPEAAGQLARSGHEQRQVDEQQHADG 53
           VAP E    L +  H  +Q+ E+Q   G
Sbjct: 28  VAPIERVKLLLQVQHISKQISEEQRYKG 55


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 321 HPTTRKMNTPCSAFSRS 271
           +P+T  +NT C+   R+
Sbjct: 345 YPSTETLNTKCNTLERT 361


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 225 TSAPHVTPITTTSLAQTRPSAALSDVD 145
           T+    TP TT + + T P   + +VD
Sbjct: 671 TTTTTTTPNTTQNASATTPPPQVDEVD 697


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,601
Number of Sequences: 438
Number of extensions: 1680
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)