Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F07
         (214 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   1.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   2.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   2.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   2.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   2.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   5.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   6.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   8.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   8.9  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   PRAAGIRHEWWNSWLSKNVD 65
           P+ A   HE   +W SKNV+
Sbjct: 177 PQQAQEVHEKLRNWFSKNVN 196


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 28  TSGGTVGCPRMLMPKQNRCFY 90
           TSG   G PR ++ K+   FY
Sbjct: 43  TSGLVRGFPRTVLDKEVHVFY 63


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 28  TSGGTVGCPRMLMPKQNRCFY 90
           TSG   G PR ++ K+   FY
Sbjct: 43  TSGLVRGFPRTVLDKEVHVFY 63


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 75  LFWHQHSWTTNCS 37
           LFW Q+ W    S
Sbjct: 100 LFWQQYPWVLGVS 112


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 45  WLSKNVDAKTKP 80
           WL + ++AKT P
Sbjct: 477 WLGETIEAKTYP 488


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 100 YFIDRNSGFVLASTFLDNQLFHHSC 26
           Y+IDRNS + +    +   LF  +C
Sbjct: 283 YWIDRNSAYKIDQR-IQKGLFLFAC 306


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 146  TTMXTQTSRISEKIPNL 196
            TT+ +QT RIS   P L
Sbjct: 1091 TTLTSQTIRISWMSPPL 1107


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 27  HEWWNSWL 50
           H  WNSW+
Sbjct: 470 HLVWNSWM 477


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 59  ILGQPTVPP 33
           ILG+PT+ P
Sbjct: 742 ILGKPTISP 750


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,299
Number of Sequences: 438
Number of extensions: 842
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)