Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F02
         (272 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   1.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   3.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   5.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   7.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   7.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    19   7.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    19   9.5  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 189 GCAICSAKGAEDDGRRRPHNSKERSIDW 106
           GC  C+ K  E   +   H +++R+ DW
Sbjct: 73  GCTKCNQKQKETAEKVIRHLTQKRARDW 100


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 250 WIS*SAQAESPPWRQYRCLTWL 185
           W S S+ +      +++CL+WL
Sbjct: 378 WNSISSLSHGGQLARFKCLSWL 399


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 WGRRLPSSSAPLALH 178
           + R L S+ APL LH
Sbjct: 401 FNRHLNSNRAPLGLH 415


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 WGRRLPSSSAPLALH 178
           + R L S+ APL LH
Sbjct: 408 FNRHLNSNRAPLGLH 422


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 176 HMAQPSQAPVLPPWR 220
           H +  S  P+L PW+
Sbjct: 576 HPSDKSAKPMLKPWQ 590


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 116 DLSLELWGRRLPSS 157
           +++ EL+GRRL +S
Sbjct: 444 EITWELYGRRLSNS 457


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 109 IYGPFFGVM 135
           I+G FFG+M
Sbjct: 38  IFGQFFGIM 46


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -3

Query: 267 HDNGYDGFH 241
           H N Y G+H
Sbjct: 80  HQNSYTGYH 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,848
Number of Sequences: 336
Number of extensions: 1746
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4471194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)