Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_F02
(272 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 86 4e-18
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 85 6e-18
05_01_0043 - 295041-295173,296252-296537,296616-296697 85 6e-18
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 84 1e-17
01_07_0267 + 42410174-42410252,42410679-42411097 79 5e-16
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 31 0.13
05_01_0609 + 5443780-5443875,5444540-5445136,5448792-5448881,544... 29 0.38
08_01_0804 - 7774631-7775152,7775985-7776083 29 0.67
04_03_0041 + 10046063-10046170,10046284-10046742 29 0.67
10_08_0401 + 17629912-17630376 28 1.2
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 27 1.5
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823... 27 2.0
07_01_0430 - 3277844-3277851,3277893-3278096,3278214-3278303,327... 27 2.0
05_03_0043 - 7702940-7703077,7703361-7703420,7703562-7703612,770... 27 2.0
02_05_0692 + 30973171-30973908 27 2.0
12_02_0842 - 23588826-23589198,23589548-23590203 27 2.7
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 27 2.7
05_03_0685 + 16992899-16993570 27 2.7
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 26 3.6
01_06_1474 + 37630471-37631736,37631965-37632028,37632928-37633124 26 3.6
12_02_0711 + 22404710-22404824,22405726-22406288,22406386-224065... 25 6.3
12_01_0991 - 10057736-10058249,10058412-10059241,10059266-100606... 25 6.3
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 25 6.3
11_01_0433 - 3323372-3324616,3324708-3324905 25 6.3
10_08_0841 - 20948719-20948919,20949624-20950388,20950475-209510... 25 6.3
07_01_0504 + 3756714-3757054,3757205-3757259,3757403-3757477,375... 25 6.3
02_04_0572 + 23972319-23973683 25 6.3
05_03_0507 + 14814761-14815272,14816215-14816346,14817391-14817403 25 8.3
04_04_0347 + 24564589-24565296 25 8.3
04_03_0621 - 18102243-18104249 25 8.3
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 85.8 bits (203), Expect = 4e-18
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +1
Query: 118 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M V+RPE +MKSI+PVVMA
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 85.4 bits (202), Expect = 6e-18
Identities = 37/51 (72%), Positives = 46/51 (90%)
Frame = +1
Query: 118 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
PFFG +GAASA++FS +GAAYGTAKSG G+A+M V+RPE +MKSI+PVVMA
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 85.4 bits (202), Expect = 6e-18
Identities = 37/51 (72%), Positives = 46/51 (90%)
Frame = +1
Query: 118 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
PFFG +GAASA++FS +GAAYGTAKSG G+A+M V+RPE +MKSI+PVVMA
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 63
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 84.2 bits (199), Expect = 1e-17
Identities = 36/51 (70%), Positives = 46/51 (90%)
Frame = +1
Query: 118 PFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M V+RPE +MKSI+PVVMA
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 64
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 79.0 bits (186), Expect = 5e-16
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +1
Query: 112 YGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
+ PF G +GAA A++FS +GAAYGTA+SG G+A M V+RPE +MKSI+PVVMA
Sbjct: 10 FAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMA 62
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 124 FGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVV 264
F +G A +I S LGAA+G +G+ + A+ P K++I V+
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVI 66
>05_01_0609 +
5443780-5443875,5444540-5445136,5448792-5448881,
5449615-5450121
Length = 429
Score = 29.5 bits (63), Expect = 0.38
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 95 WPKIQ-SMDLSLELWGRRLPSSSAPL 169
WP ++ S D LEL RRLPS++ PL
Sbjct: 126 WPSVKWSSDCLLELQHRRLPSTAPPL 151
>08_01_0804 - 7774631-7775152,7775985-7776083
Length = 206
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -3
Query: 162 AEDDGRRRPHNSKERSIDWIFGHFS*MWEYLQVP--KTLMTICTH 34
A+ G R+ H + + D IFG + + +++P +TL+T+C H
Sbjct: 139 AQGHGGRQLHQIRYTTSDRIFGDYPLLSRKVRMPSPRTLLTVCHH 183
>04_03_0041 + 10046063-10046170,10046284-10046742
Length = 188
Score = 28.7 bits (61), Expect = 0.67
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 218 AMAAIPVPDLAVPYAAPRELKMMADAAPITPKKGP*IG 105
A A P P A P A K DAA PKK P G
Sbjct: 108 AKPAAPAPKAAAPKPAKDAAKPKKDAAAAKPKKAPAAG 145
>10_08_0401 + 17629912-17630376
Length = 154
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 130 VMGAASAIIFSSLGAAYGTAKSGTGIAA 213
V GAA+ F++L AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 119 LSLELWGRRLPSSSAPLALHMAQPSQAPVLPP 214
+S L GRR PS S L + ++AP LPP
Sbjct: 87 VSAALVGRRRPSRSLRCLLLLGTSTRAPFLPP 118
>12_02_0917 +
24281029-24281137,24281998-24282095,24282196-24282372,
24282490-24282590,24282684-24282759,24282843-24282902,
24282999-24283195,24283296-24283392,24283478-24283564,
24283925-24283983,24284535-24284626,24284706-24284783,
24284891-24285051,24285303-24285530
Length = 539
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 106 PIY--GPFFGVMGAASAIIFSSLGAAYGTAK 192
PI+ G FG+MGA F S GA + TA+
Sbjct: 285 PIFTAGHSFGMMGAVLVSAFESTGAHFATAR 315
>07_01_0430 -
3277844-3277851,3277893-3278096,3278214-3278303,
3279048-3279179,3279220-3279403
Length = 205
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 233 SGRITAMAAIPVPDLAVPYAAP 168
SG+++AMA+ PVP A P P
Sbjct: 19 SGKVSAMASPPVPSSAAPRRRP 40
>05_03_0043 -
7702940-7703077,7703361-7703420,7703562-7703612,
7705355-7705408,7707260-7707325,7707552-7707629,
7708568-7708970,7710492-7710493,7711076-7711078
Length = 284
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 216 HGGNTGA*LGCAICSAKGAEDDGRR 142
H GNTGA A +GA DDG++
Sbjct: 223 HNGNTGAQQPAAQPEQQGANDDGKK 247
>02_05_0692 + 30973171-30973908
Length = 245
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = -3
Query: 216 HGGNTGA*LGCAICSAKGAEDDGRRRPHNSKERSIDWIFGH 94
+GG GC + + R+RP +S +R W+ H
Sbjct: 26 NGGGASGSRGCGLRHQRQRPSVWRQRPRSSSQRRRQWLLWH 66
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 176 HMAQPSQAPVLPPWR*FGLSRS*NPSYPLS 265
H + AP+LPPW S S +PS LS
Sbjct: 155 HHRRMMAAPILPPWMSSSPSSSSSPSVTLS 184
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 233 SGRITAMAAIPVPDLAVPYAAP 168
S T + +PVP AVPYAAP
Sbjct: 148 SAASTTHSVLPVPVPAVPYAAP 169
>05_03_0685 + 16992899-16993570
Length = 223
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -3
Query: 213 GGNTGA*LGCAICSAKGAE-DDGRRRP---HNSKERSIDWIF 100
GG G L CAIC A+ A+ ++GR P H R +D F
Sbjct: 127 GGGGGKVLECAICIAEFADGEEGRLLPRCGHRFHARCVDMWF 168
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 140 RRLPSSSAPLALHMAQPSQAPVLPPWR 220
RR PS+S A + PS+A PP R
Sbjct: 25 RRAPSASPAAAASLPSPSRASCAPPLR 51
>01_06_1474 + 37630471-37631736,37631965-37632028,37632928-37633124
Length = 508
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 234 LRPNHRHGGNTGA*LGCAICSAKGAEDDG 148
L P HR+GG++G+ G A+ A G E+ G
Sbjct: 56 LFPRHRNGGSSGSYSGQAV-PADGGENGG 83
>12_02_0711 +
22404710-22404824,22405726-22406288,22406386-22406547,
22406664-22407257
Length = 477
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 213 GGNTGA*LGCAICSAKGAEDDGRRRP 136
G +TG L A+ +A GA DGRRRP
Sbjct: 120 GTSTGG-LITAMLAAPGAGGDGRRRP 144
>12_01_0991 -
10057736-10058249,10058412-10059241,10059266-10060633,
10061785-10062327,10066274-10066498,10066590-10066640
Length = 1176
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 95 WPKIQSMDLSLELWGRRLPSSSAPLA 172
W K+Q + LS G LP+ S PLA
Sbjct: 628 WNKLQQLGLSYNNIGGTLPNWSEPLA 653
>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -1
Query: 272 PAMTTGMMDFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAAPI 132
PA G D + AMA +P AVP P A AAP+
Sbjct: 913 PARHAGCDDVSLVEKFRNAMAKRDLPTAAVPPTTPPPAAAAAAAAPV 959
>11_01_0433 - 3323372-3324616,3324708-3324905
Length = 480
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 37 CADSHQSFRDL*ILPHSRK---MAENPIYGPFFGVMGAASAIIFSSLGAAYGTAK 192
CA S+Q + L LP+S MA + F+G+MG+ +A + S L Y T +
Sbjct: 62 CA-SNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLYVEYRTRR 115
>10_08_0841 -
20948719-20948919,20949624-20950388,20950475-20951023,
20951097-20951237,20951313-20951519,20951556-20951724,
20951899-20952003,20952087-20952208,20952291-20952412,
20953234-20953516
Length = 887
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 233 SGRITAMAAIPVPDLAVPYAAPRELK 156
SGR TA AA P P+ V A P + K
Sbjct: 25 SGRATAAAAAPAPENKVFVALPAQHK 50
>07_01_0504 +
3756714-3757054,3757205-3757259,3757403-3757477,
3757638-3757729,3757914-3757995,3758138-3758221,
3758326-3758445
Length = 282
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 96 GRKSNLWTFLWSYGGGVCHHLQLPWRCIWHSQVRHR-YCRHGGDSA*ADHE 245
GR+S + + LWS GGG L P W ++ R + GG SA D E
Sbjct: 24 GRRSGV-SGLWSNGGGGGGRLVAPPSAPWPARARGKNRSGGGGRSATKDDE 73
>02_04_0572 + 23972319-23973683
Length = 454
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 98 PKIQSMDLSLELWGRRLPSSSAPL 169
PK++ +DLS +G ++PSS A L
Sbjct: 413 PKLRQLDLSHNNFGGKIPSSLANL 436
>05_03_0507 + 14814761-14815272,14816215-14816346,14817391-14817403
Length = 218
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 118 PFFGVMGAASAIIFSSLGAAYGTAKSGT 201
PF G G A+ F + AYG A +GT
Sbjct: 102 PFLGGGGGATTAAFRAPSDAYGGAGAGT 129
>04_04_0347 + 24564589-24565296
Length = 235
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 74 YSHIQEKWPKIQSMDLSLELWGRRLPSSSAPLALHMAQPSQAP 202
Y H WP ++ S G + AP +H QP+QAP
Sbjct: 32 YPHHHAPWPA-RAQSPSAPDHGAHGHHAPAPAPVHADQPAQAP 73
>04_03_0621 - 18102243-18104249
Length = 668
Score = 25.0 bits (52), Expect = 8.3
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 66 PVNTPTFKKNGRKSNLWTFLWSYGGGVCHHLQLPWR--CIWHSQVRHRYCRHGGDSA*AD 239
P+ P+ ++ G+++ W YGGG+ WR HS V R S
Sbjct: 527 PIRVPS-RRGGQRATRWDQRGGYGGGMV--TSTSWRPLAAAHSDVIQRDAPRSPQSINNF 583
Query: 240 HEIHHT 257
H HT
Sbjct: 584 HSRKHT 589
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,618,727
Number of Sequences: 37544
Number of extensions: 230428
Number of successful extensions: 695
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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