Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_F02
(272 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 87 2e-18
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 87 2e-18
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 87 2e-18
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 87 2e-18
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 84 1e-17
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 84 1e-17
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical pr... 25 5.5
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 25 5.5
Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical pr... 25 7.3
U58761-2|AAB00713.1| 308|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 25 9.7
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 25 9.7
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 25 9.7
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 25 9.7
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 25 9.7
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 25 9.7
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 25 9.7
AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 86.6 bits (205), Expect = 2e-18
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 76 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSII 255
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M V+RPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 256 PVVMA 270
PV+MA
Sbjct: 61 PVIMA 65
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 86.6 bits (205), Expect = 2e-18
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 76 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSII 255
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M V+RPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 256 PVVMA 270
PV+MA
Sbjct: 61 PVIMA 65
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 86.6 bits (205), Expect = 2e-18
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 76 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSII 255
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M V+RPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 256 PVVMA 270
PV+MA
Sbjct: 61 PVIMA 65
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 86.6 bits (205), Expect = 2e-18
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 76 LPHSRKMAENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSII 255
+ + + AE Y PFFG MGAASA IF+ LGAAYGTAKS GI +M V+RPE IMKS+I
Sbjct: 1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVI 60
Query: 256 PVVMA 270
PV+MA
Sbjct: 61 PVIMA 65
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 84.2 bits (199), Expect = 1e-17
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +1
Query: 100 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMA
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMA 73
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 84.2 bits (199), Expect = 1e-17
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +1
Query: 100 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
E +YGPFFG +G SA+ F++ G+AYGTAK+GTGIA+MAV RP+ +MK+IIPVVMA
Sbjct: 17 EQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMA 73
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 248 DFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAAPITPKKGP 114
D + + + A+ V D+AV A+P E + A+P++ + P
Sbjct: 31 DETLIASKTIQTGAVQVNDIAVAEASPAETDAKSSASPVSGPEPP 75
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 248 DFMICSGRITAMAAIPVPDLAVPYAAPRELKMMADAAPITPKKGP 114
D + + + A+ V D+AV A+P E + A+P++ + P
Sbjct: 31 DETLIASKTIQTGAVQVNDIAVAEASPAETDAKSSASPVSGPEPP 75
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 140 RRLPSSSAPLALHMAQPSQAPV 205
RRLPS AP ++ +QP+ P+
Sbjct: 694 RRLPSHPAPPPVNQSQPANQPM 715
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 140 RRLPSSSAPLALHMAQPSQAPV 205
RRLPS AP ++ +QP+ P+
Sbjct: 698 RRLPSHPAPPPVNQSQPANQPM 719
>Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical
protein F41E7.3 protein.
Length = 402
Score = 25.4 bits (53), Expect = 5.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 126 WSYGGGVCHHLQL 164
W +GGG+CH L L
Sbjct: 103 WIFGGGLCHGLPL 115
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 75 TPTFKKNGRKSNLWTFLWSYGGG 143
T T NG+++ +W + +YGGG
Sbjct: 94 TYTILVNGKETEVWCDMQTYGGG 116
>Z81454-3|CAB03799.2| 378|Caenorhabditis elegans Hypothetical
protein B0391.5 protein.
Length = 378
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 177 IWHSQVRHRYCRHGGDSA*ADHEIHHTRCHGG 272
I H +V R CR + H + + RC GG
Sbjct: 112 ICHKEVSLRLCRDWSILNFSHHNVKYQRCDGG 143
>U58761-2|AAB00713.1| 308|Caenorhabditis elegans Hypothetical
protein C01F1.5 protein.
Length = 308
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 20 VSWSECVQIVIRVLGTCKYSHIQEKWPKIQSMDLSLELWGR 142
VS+ + + I LGT Y+ IQ WP +++ LW R
Sbjct: 175 VSYVQAIGGGIPNLGTPDYNPIQLTWP-FDPESITVPLWAR 214
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 159 QLPWRCIWHSQVRHRYCRH 215
Q PWRC W S R R C H
Sbjct: 602 QGPWRCQWCS--RCRRCNH 618
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 159 QLPWRCIWHSQVRHRYCRH 215
Q PWRC W S R R C H
Sbjct: 602 QGPWRCQWCS--RCRRCNH 618
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 482 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 521
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 508 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 547
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 482 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 521
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 508 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 547
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 349 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 388
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 482 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 521
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 139 AASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIP 258
+A ++I S+ +AY +GT M + P M S++P
Sbjct: 508 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 547
>AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical
protein C53D5.4 protein.
Length = 301
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 122 SLELWGRRLPSSSAPLALHMAQPSQAP 202
S E G+R +AP + H AQP+ P
Sbjct: 204 SPEKSGKRAKKRAAPSSAHEAQPNNGP 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,559,464
Number of Sequences: 27780
Number of extensions: 167404
Number of successful extensions: 411
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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