Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_F02
         (272 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...   104   2e-25
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.39 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.39 
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   2.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   2.8  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   6.4  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    19   8.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      19   8.4  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score =  104 bits (250), Expect = 2e-25
 Identities = 50/57 (87%), Positives = 55/57 (96%)
 Frame = +1

Query: 100 ENPIYGPFFGVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVIRPEQIMKSIIPVVMA 270
           ++PIY PFFGVMGAASAIIFS+LGAAYGTAKSGTGIAAM+V+RPE IMKSIIPVVMA
Sbjct: 5   DHPIYAPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMA 61


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 0.39
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 20  VSWSECVQIVIRVLGTCKYSHIQ 88
           +SW E +QI + VL   +Y H Q
Sbjct: 694 LSWLERIQIALDVLEGIRYLHSQ 716


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 0.39
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 20  VSWSECVQIVIRVLGTCKYSHIQ 88
           +SW E +QI + VL   +Y H Q
Sbjct: 732 LSWLERIQIALDVLEGIRYLHSQ 754


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 111 LWTFLWSYGGGVCHH-LQLP 167
           LW    ++ GG CH  +Q+P
Sbjct: 2   LWRMTGTWVGGFCHSIIQIP 21


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 181 GTAKSGTGIAAMAVIRP 231
           GTAK G     MAV+ P
Sbjct: 547 GTAKMGPSYDPMAVVSP 563


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 46  YLHTLTPRNYFSTL 5
           YLHT+T  N F  L
Sbjct: 99  YLHTITSPNKFVRL 112


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 193 SGTGIAAMAVIRPEQIMKSIIPVVM 267
           +G  +A  +  RP+ ++K   P+VM
Sbjct: 21  AGQVLAGSSSPRPKPLLKKEYPLVM 45


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 192 LGCAICSAKGAEDDGRRRPHNS 127
           L C + + +GA+D   R P ++
Sbjct: 308 LHCNMENTEGADDASERNPRSA 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,613
Number of Sequences: 438
Number of extensions: 2077
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)