Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_E19
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   7.3  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   7.3  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   7.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   7.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.3  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   7.3  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   9.7  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   9.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.7  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 358 KVYIWETEENHHNCDDIKEE 417
           K   WE   N  NC DI EE
Sbjct: 271 KYNTWEPISNLINCSDILEE 290


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 405 IITIVMILFSFPYVHFIWV 349
           +  +  I+F+  Y  FIW+
Sbjct: 451 VFPVAFIIFNILYWSFIWI 469


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 359 LFGFTKSSFEKYVHSFLSVC 300
           L+G T S  +KY      VC
Sbjct: 396 LYGMTPSDIDKYSRIVFPVC 415


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 359 LFGFTKSSFEKYVHSFLSVC 300
           L+G T S  +KY      VC
Sbjct: 396 LYGMTPSDIDKYSRIVFPVC 415


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -3

Query: 493 TVYGLCSDLSISVDGLSFHHY 431
           T+ G C D+ +   G    HY
Sbjct: 321 TLKGYCIDMEVPYSGTLISHY 341


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 295 CLQTDRKLWTYFSKLDFVNPNKVYIWETEENHHNCDDIKE 414
           C++   K   Y  KLD   P+++      +  ++CD +K+
Sbjct: 99  CIENHLKQLGYVQKLDTWVPHELKEKHLTQRINSCDLLKK 138


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 359 LFGFTKSSFEKYVHSFLSVC 300
           L+G T S  +KY      VC
Sbjct: 334 LYGMTPSDIDKYSRIVFPVC 353


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -3

Query: 259 LSIYCKCLMVKDPAL*SSNLYK 194
           + +YC+C++     L  +N++K
Sbjct: 59  VQLYCECILKNFNILDKNNVFK 80


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 211 SSNLYKNEVFRKYL*FRYQINY 146
           ++N Y N  +  Y    Y INY
Sbjct: 92  NNNNYNNNNYNNYKKLYYNINY 113


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 216 NAGSFTIKHLQYMLR*THSGIQF 284
           N G F +  L  MLR   SG+Q+
Sbjct: 728 NDGKFQVLQLVGMLRGIASGMQY 750


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,596
Number of Sequences: 438
Number of extensions: 2930
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)