Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_E13
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 0.55
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 0.55
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 29 0.55
AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical ... 29 0.55
AF016688-5|AAB66073.1| 666|Caenorhabditis elegans Hypothetical ... 28 1.3
Z75547-3|CAA99902.1| 335|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF125462-5|AAD12855.2| 125|Caenorhabditis elegans Temporarily a... 27 2.2
Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical pr... 27 2.9
L15188-2|AAA27947.2| 648|Caenorhabditis elegans Polo kinase pro... 27 2.9
L15188-1|AAM22025.1| 649|Caenorhabditis elegans Polo kinase pro... 27 2.9
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 27 2.9
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 27 2.9
AF080581-1|AAC34661.1| 648|Caenorhabditis elegans polo-like kin... 27 2.9
AF057165-1|AAC14129.1| 649|Caenorhabditis elegans putative seri... 27 2.9
Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical p... 27 3.9
AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical ... 27 3.9
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 27 3.9
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 27 3.9
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 26 5.1
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 26 5.1
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 26 5.1
AY383563-1|AAQ96595.1| 539|Caenorhabditis elegans excitatory GA... 26 5.1
AF098990-1|AAC67448.3| 539|Caenorhabditis elegans Expulsion def... 26 5.1
Z81493-5|CAB04042.1| 419|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical pr... 26 6.8
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 26 6.8
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 26 6.8
U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical pr... 26 6.8
AY383563-2|AAQ96594.1| 533|Caenorhabditis elegans excitatory GA... 26 6.8
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 26 6.8
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 26 6.8
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 26 6.8
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 26 6.8
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical pr... 25 8.9
U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protei... 25 8.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 8.9
U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein. 25 8.9
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 25 8.9
AC006770-3|AAF60595.1| 508|Caenorhabditis elegans Hypothetical ... 25 8.9
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 120 HQVVTEDSRT*KIEAVQGRPPRAVPLRESELPPTGPRHQVPQRE 251
HQ++ E + IEA + +P + + R S LPP P+ PQ+E
Sbjct: 304 HQLMMEQLKA-SIEAEKTKPKKEIKSRVSLLPPPAPK--APQKE 344
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 120 HQVVTEDSRT*KIEAVQGRPPRAVPLRESELPPTGPRHQVPQRE 251
HQ++ E + IEA + +P + + R S LPP P+ PQ+E
Sbjct: 372 HQLMMEQLKA-SIEAEKTKPKKEIKSRVSLLPPPAPK--APQKE 412
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 29.5 bits (63), Expect = 0.55
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 16 QATDRQDPYDFSSDEEAEPI-LRAAHSQDPGSSHRSTRSSQKTLEPERLKQ--FKVALH- 183
+ D D YD S+ E + L ++HS D GS + + R Q E ERL F ++ H
Sbjct: 28 EIVDGLDFYDTMSETEWKSARLSSSHSDDIGSLNDALRVQQLEEEQERLNNSLFSLSSHF 87
Query: 184 --ELFRSERVNSL-PLDRVTKFLNE 249
FR +++N P DR+ K L++
Sbjct: 88 AQVQFRIKQMNEADPSDRL-KLLSD 111
>AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical
protein F37E3.1 protein.
Length = 798
Score = 29.5 bits (63), Expect = 0.55
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 188 SSWRATLNCFNLSGSRVFCDDLVERCEDPGSCE 90
+ W+ LN SGS++F +++E+C GS E
Sbjct: 435 TDWKDCLNKDAFSGSQIFVREVIEKCRRFGSYE 467
>AF016688-5|AAB66073.1| 666|Caenorhabditis elegans Hypothetical
protein F18A12.7 protein.
Length = 666
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 188 SSWRATLNCFNLSGSRV---FCDDLVERCEDPGSCECAARSIGSASSSDEK 45
++W + + +G R+ F D ERC D GSCE A S+G S +K
Sbjct: 389 AAWGIDIEVWTTTGKRMRLRFKKDDGERC-DIGSCELAGISLGVLGSLPKK 438
>Z75547-3|CAA99902.1| 335|Caenorhabditis elegans Hypothetical
protein R11D1.2 protein.
Length = 335
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 157 LKQFKVALHELFRSERVNSLPLDRVTKFLNEKYSHQTF 270
++ F++ L LF +VN LD+V NE + F
Sbjct: 98 MELFRIKLETLFIGSKVNKANLDKVLSLFNENLPPEDF 135
>AF125462-5|AAD12855.2| 125|Caenorhabditis elegans Temporarily
assigned gene nameprotein 313 protein.
Length = 125
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2
Query: 248 SLRNLVTRSSGREFTLSERNSSWRATL 168
S+RNL+T S + T +ERN++WRA+L
Sbjct: 10 SMRNLLT-SCSKAIT-AERNNAWRASL 34
>Z73972-3|CAA98259.1| 305|Caenorhabditis elegans Hypothetical
protein F15H10.6 protein.
Length = 305
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 112 HRSTRSSQKTLEPERLKQFKVALHELFRSERVNSLPLDRVTKFLNEKYSHQTFDAGEVQ 288
H S+KTL PE LK A+ +L E V + P+++ + + ++ D G+++
Sbjct: 107 HNFYERSKKTLSPELLKGIAKAMEKL---EHVKT-PMEKTKSLIGKFFNEMWKDVGKLR 161
>L15188-2|AAA27947.2| 648|Caenorhabditis elegans Polo kinase
protein 1, isoform a protein.
Length = 648
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 88 APRGVSARPPRPMRSHTGL 32
APRGV AR RP+ GL
Sbjct: 322 APRGVDARSQRPLNGRAGL 340
>L15188-1|AAM22025.1| 649|Caenorhabditis elegans Polo kinase
protein 1, isoform b protein.
Length = 649
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 88 APRGVSARPPRPMRSHTGL 32
APRGV AR RP+ GL
Sbjct: 323 APRGVDARSQRPLNGRAGL 341
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 159 EAVQGRPPRAVPLRESELPPTGP 227
EA RP P+R+S LPP P
Sbjct: 386 EASDDRPSAPTPIRDSSLPPPPP 408
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 159 EAVQGRPPRAVPLRESELPPTGP 227
EA RP P+R+S LPP P
Sbjct: 386 EASDDRPSAPTPIRDSSLPPPPP 408
>AF080581-1|AAC34661.1| 648|Caenorhabditis elegans polo-like
kinase-1 protein.
Length = 648
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 88 APRGVSARPPRPMRSHTGL 32
APRGV AR RP+ GL
Sbjct: 322 APRGVDARSQRPLNGRAGL 340
>AF057165-1|AAC14129.1| 649|Caenorhabditis elegans putative
serine/threonine proteinkinase protein.
Length = 649
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 88 APRGVSARPPRPMRSHTGL 32
APRGV AR RP+ GL
Sbjct: 323 APRGVDARSQRPLNGRAGL 341
>Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 179 RATLNCFNLSGSRVFCDDLVERCEDPGSCECAAR 78
RA ++ +L+G +++ + CE+ C+C AR
Sbjct: 456 RANMSFADLTGQKIWMPTRSKACENGTKCKCDAR 489
>AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 179 RATLNCFNLSGSRVFCDDLVERCEDPGSCECAAR 78
RA ++ +L+G +++ + CE+ C+C AR
Sbjct: 456 RANMSFADLTGQKIWMPTRSKACENGTKCKCDAR 489
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 82 AAHSQDPGSSHRSTRSSQKTLEPERLKQFKVALHELFRSE 201
+AH+Q+ + +TL E+LKQ+K +H + E
Sbjct: 1711 SAHAQEQLNDVARQTGCVQTLIEEKLKQYKATIHNIVELE 1750
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 19 ATDRQDPYDFSSDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQFK 171
++D D D SSD++ + ++ S++ GSS S+ SS + + E+ K+ K
Sbjct: 144 SSDSSDSSD-SSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKK 193
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 159 EAVQGRPPRAVPLRESELPPTGPRHQVPQREVLAP 263
+ V G P R V ++ P GP +PQ++++ P
Sbjct: 554 QMVNGTPQRVVIMQSPTHLPGGPVVMIPQQQMVPP 588
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 26.2 bits (55), Expect = 5.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 197 ERNSSWRA----TLNCFNLSGSRVFCDDLVERCEDPGSCECAARSIGSASSSDEKSYGSC 30
E NS RA L+ FN + FC L++ E +SI + + KSY C
Sbjct: 254 ETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKC 313
Query: 29 LSVAWRYPR 3
L V + R
Sbjct: 314 LDVDYESSR 322
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 26.2 bits (55), Expect = 5.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 197 ERNSSWRA----TLNCFNLSGSRVFCDDLVERCEDPGSCECAARSIGSASSSDEKSYGSC 30
E NS RA L+ FN + FC L++ E +SI + + KSY C
Sbjct: 254 ETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKC 313
Query: 29 LSVAWRYPR 3
L V + R
Sbjct: 314 LDVDYESSR 322
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 26.2 bits (55), Expect = 5.1
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 197 ERNSSWRA----TLNCFNLSGSRVFCDDLVERCEDPGSCECAARSIGSASSSDEKSYGSC 30
E NS RA L+ FN + FC L++ E +SI + + KSY C
Sbjct: 254 ETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKC 313
Query: 29 LSVAWRYPR 3
L V + R
Sbjct: 314 LDVDYESSR 322
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 159 EAVQGRPPRAVPLRESELPPTGPRHQVPQREVLAP 263
+ V G P R V ++ P GP +PQ++++ P
Sbjct: 554 QMVNGTPQRVVIMQSPTHLPGGPVVMIPQQQMVPP 588
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
protein ZK430.5 protein.
Length = 1276
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 SERVNSLPLDRVTKFLNEKYSHQTFDA-GEVQSALGTMMN 312
+E N+ L+++T+F + S + FD G +Q + M N
Sbjct: 86 TEPTNAHSLEKLTRFTSHYVSSECFDGLGSIQKMMQNMFN 125
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 26.2 bits (55), Expect = 5.1
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 52 SDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQFKVALHELFRSERVNSLPLDRV 231
S++ +PILR + + SH++ S +P+++ F+ L RS RV +
Sbjct: 123 SEQSEQPILRPSRMESTNQSHQNIDSMYHIDQPQQV-VFQANLQN--RSNRVMQQTPNNS 179
Query: 232 TKFLNE---KYSHQTFDAGEVQSALGT 303
+ N K H + ++ ++QS T
Sbjct: 180 SNHQNHLSLKQPHLSMNSTQLQSGFQT 206
>AY383563-1|AAQ96595.1| 539|Caenorhabditis elegans excitatory GABA
receptor EXP-1B protein.
Length = 539
Score = 26.2 bits (55), Expect = 5.1
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Frame = +1
Query: 10 YLQATDRQD---PYDFSSDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQFKVAL 180
+ Q RQD YD+ +E EP+ R A SSH + + E E Q
Sbjct: 27 HAQRDHRQDISQHYDYLMEENDEPLGRGAAPSKYRSSHGQAQHRPEMTESENFAQPNT-- 84
Query: 181 HELFRSERVNSLPLDR-VTKFLNE-KYSHQTFDAGE 282
+F S V+S R +FL +Y H+ E
Sbjct: 85 ESVFSSGGVDSYGETRDFLQFLRRIQYDHRQVPENE 120
>AF098990-1|AAC67448.3| 539|Caenorhabditis elegans Expulsion
defective (defecation)protein 1 protein.
Length = 539
Score = 26.2 bits (55), Expect = 5.1
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Frame = +1
Query: 10 YLQATDRQD---PYDFSSDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQFKVAL 180
+ Q RQD YD+ +E EP+ R A SSH + + E E Q
Sbjct: 27 HAQRDHRQDISQHYDYLMEENDEPLGRGAAPSKYRSSHGQAQHRPEMTESENFAQPNT-- 84
Query: 181 HELFRSERVNSLPLDR-VTKFLNE-KYSHQTFDAGE 282
+F S V+S R +FL +Y H+ E
Sbjct: 85 ESVFSSGGVDSYGETRDFLQFLRRIQYDHRQVPENE 120
>Z81493-5|CAB04042.1| 419|Caenorhabditis elegans Hypothetical
protein F01D5.6 protein.
Length = 419
Score = 25.8 bits (54), Expect = 6.8
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 34 DPYDFSSDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQFKVALHELFRSERVNS 213
DP SDEE +++ + +S S L P+R + VA+ + S V
Sbjct: 49 DPSAIVSDEERSRLVQRVNQLHSLTSGIKNTSPSCALMPDRNLEIIVAIIDKIGS--VPG 106
Query: 214 LPLDRVTKFLNE-KYSHQTF-DAG 279
+P+D + KF N K +Q F D G
Sbjct: 107 VPVD-IEKFANNLKRRYQNFQDVG 129
>Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical
protein C02C6.2b protein.
Length = 554
Score = 25.8 bits (54), Expect = 6.8
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Frame = -2
Query: 224 SSGREFTLSERNSSWRATLNCFNLSGSRVFCDDLVERCEDPGSCEC-AARSIG---SASS 57
S E T S ++ + C LS + C E C+ G+C C + G +
Sbjct: 11 SVSEETTEKSGRKSPKSPIECRKLSKAPPLCCKNGEECKVAGNCVCKPPKPTGPNDEKPT 70
Query: 56 SDEKSY-----GSCLSVAWR 12
S ++Y GSC + WR
Sbjct: 71 SSRETYDVFLGGSCGTTVWR 90
>Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical
protein K10C8.1 protein.
Length = 566
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -2
Query: 281 SPASNVW-CEYFS----LRNLVTRSSGREFTLSERNSSWRATLN 165
SP S + CE FS L L SG+++T +R ++WR+ N
Sbjct: 496 SPGSYAFLCEKFSNDSSLAPLDELDSGKKWTFEQRQTAWRSFKN 539
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 103 PGLASAPRGVSARPPRPMRSH--TGLVYP*P 17
P L++AP SA+PP +++H G+ P P
Sbjct: 611 PSLSTAPSSSSAQPPTMIQAHPMAGVFIPPP 641
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 103 PGLASAPRGVSARPPRPMRSH--TGLVYP*P 17
P L++AP SA+PP +++H G+ P P
Sbjct: 593 PSLSTAPSSSSAQPPTMIQAHPMAGVFIPPP 623
>U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical
protein K10C2.4 protein.
Length = 418
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 71 GSASSSDEKSYGSCLSVAWR 12
G+ S +E +YGS L ++WR
Sbjct: 351 GTVSGPEEGAYGSMLELSWR 370
>AY383563-2|AAQ96594.1| 533|Caenorhabditis elegans excitatory GABA
receptor EXP-1A protein.
Length = 533
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +1
Query: 10 YLQATDRQD---PYDFSSDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQ 165
+ Q RQD YD+ +E EP+ R A SSH + + E E Q
Sbjct: 27 HAQRDHRQDISQHYDYLMEENDEPLGRGAAPSKYRSSHGQAQHRPEMTESENFAQ 81
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 174 RPPRAVPLRESELPPTGPRHQVPQREVL 257
RPP RES+ PPT PRH Q V+
Sbjct: 105 RPPSRD--RESQPPPTQPRHHHHQPTVI 130
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 174 RPPRAVPLRESELPPTGPRHQVPQREVL 257
RPP RES+ PPT PRH Q V+
Sbjct: 105 RPPSRD--RESQPPPTQPRHHHHQPTVI 130
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 103 PGLASAPRGVSARPPRPMRSH--TGLVYP*P 17
P L++AP SA+PP +++H G+ P P
Sbjct: 593 PSLSTAPSSSSAQPPTMIQAHPMAGVFIPPP 623
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 183 RAVPLRESELPPTGPRHQVPQR 248
R+ PL +PP P H PQR
Sbjct: 821 RSTPLPPPPIPPHSPPHLTPQR 842
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 48 LIGRGGRADTPRGALARPGVLAPLHQVVTEDS 143
++ RG +T RG +A+P + + VV+ED+
Sbjct: 371 IVTRGQNGNTWRGIVAKPEGVLDVKNVVSEDA 402
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 25.4 bits (53), Expect = 8.9
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Frame = +3
Query: 78 PRGALARPGVLAPLHQVVTEDSR----T*KIEAVQGRPPRA--VPLRESELPPTGPRHQV 239
PRG+ A PG AP +R T + RP A P+RE E P +G
Sbjct: 297 PRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPASQPPVREPETPDSGYPSPA 356
Query: 240 PQ 245
PQ
Sbjct: 357 PQ 358
>Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical
protein R09A8.2 protein.
Length = 891
Score = 25.4 bits (53), Expect = 8.9
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = +1
Query: 22 TDRQDPYDFSSDEEAEPILRAAHSQDPGSS-------HRSTRSSQKTLEPERLKQF-KVA 177
TD Q+ D + EE + LR +H Q H S S K +E ER+KQF +
Sbjct: 705 TDVQN-IDVIAFEETKAQLRESHGQMKEKERLRSLDDHGSKESLSKRMEQERMKQFWQKE 763
Query: 178 LHELFRSE 201
HE R +
Sbjct: 764 KHESSRDD 771
>U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protein
17 protein.
Length = 277
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +1
Query: 1 ARGYLQATDRQDPYDFSSDEEAEPILRAAHSQD------PGSSHRSTRSSQKTLEPE 153
++ + A + Q+P D +E + +Q+ P H+ T+ SQ++ EP+
Sbjct: 114 SKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPK 170
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 168 QGRPPRAVPLRESELPPTGPRHQVP 242
Q RPPR P E PP P +P
Sbjct: 168 QRRPPRTPPSPEPRNPPRTPPSPIP 192
>U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein.
Length = 293
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +1
Query: 1 ARGYLQATDRQDPYDFSSDEEAEPILRAAHSQD------PGSSHRSTRSSQKTLEPE 153
++ + A + Q+P D +E + +Q+ P H+ T+ SQ++ EP+
Sbjct: 114 SKDQMDAQEPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPK 170
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/57 (22%), Positives = 22/57 (38%)
Frame = +1
Query: 34 DPYDFSSDEEAEPILRAAHSQDPGSSHRSTRSSQKTLEPERLKQFKVALHELFRSER 204
DP D + EE EP+ + + T EP + K+ H+ + E+
Sbjct: 361 DPIDIQAQEEQEPVNILQKENEKVEEKPVEEEEEATTEPPKKKRKMRKSHKTSKKEK 417
>AC006770-3|AAF60595.1| 508|Caenorhabditis elegans Hypothetical
protein Y46B2A.1 protein.
Length = 508
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 105 PRVLRVRRAEYRLGLL 58
PRV+R+ R Y LGLL
Sbjct: 51 PRVIRINRHRYTLGLL 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.126 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,930,389
Number of Sequences: 27780
Number of extensions: 134058
Number of successful extensions: 526
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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