Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_E10
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068004-1|AAH68004.1| 145|Homo sapiens selenoprotein M protein. 52 2e-06
BC030236-1|AAH30236.1| 145|Homo sapiens selenoprotein M protein. 52 2e-06
BC013421-1|AAH13421.1| 145|Homo sapiens selenoprotein M protein. 52 2e-06
AY043487-1|AAK95397.1| 145|Homo sapiens selenoprotein SelM prot... 52 2e-06
BC016359-1|AAH16359.3| 165|Homo sapiens 15 kDa selenoprotein pr... 36 0.067
BC005294-1|AAH05294.3| 165|Homo sapiens 15 kDa selenoprotein pr... 36 0.067
AL121989-1|CAC04186.1| 162|Homo sapiens dJ604K5.1 (15 kDa selen... 36 0.067
AF288992-1|AAG31557.1| 162|Homo sapiens 15 kDa selenoprotein pr... 36 0.067
AF288991-1|AAG31556.1| 162|Homo sapiens 15 kDa selenoprotein pr... 36 0.067
AF267982-1|AAF78966.1| 162|Homo sapiens 15 kDa selenoprotein pr... 36 0.067
AF051894-1|AAC15478.1| 162|Homo sapiens 15 kDa selenoprotein pr... 36 0.067
BC039197-1|AAH39197.1| 395|Homo sapiens MLL2 protein protein. 30 5.8
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 30 5.8
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 30 5.8
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 30 5.8
>BC068004-1|AAH68004.1| 145|Homo sapiens selenoprotein M protein.
Length = 145
Score = 51.6 bits (118), Expect = 2e-06
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +2
Query: 149 SDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXX 328
S + AR+E+C G LNRL +VK FV D P Y L +K + GA P
Sbjct: 35 SGLTRARVETCGGUQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELER 94
Query: 329 XXXXXXXXXXCNELVESRGFIKKSS 403
N LV+ GF +K++
Sbjct: 95 IPLSEMTREEINALVQELGFYRKAA 119
>BC030236-1|AAH30236.1| 145|Homo sapiens selenoprotein M protein.
Length = 145
Score = 51.6 bits (118), Expect = 2e-06
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +2
Query: 149 SDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXX 328
S + AR+E+C G LNRL +VK FV D P Y L +K + GA P
Sbjct: 35 SGLTRARVETCGGUQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELER 94
Query: 329 XXXXXXXXXXCNELVESRGFIKKSS 403
N LV+ GF +K++
Sbjct: 95 IPLSEMTREEINALVQELGFYRKAA 119
>BC013421-1|AAH13421.1| 145|Homo sapiens selenoprotein M protein.
Length = 145
Score = 51.6 bits (118), Expect = 2e-06
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +2
Query: 149 SDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXX 328
S + AR+E+C G LNRL +VK FV D P Y L +K + GA P
Sbjct: 35 SGLTRARVETCGGUQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELER 94
Query: 329 XXXXXXXXXXCNELVESRGFIKKSS 403
N LV+ GF +K++
Sbjct: 95 IPLSEMTREEINALVQELGFYRKAA 119
>AY043487-1|AAK95397.1| 145|Homo sapiens selenoprotein SelM
protein.
Length = 145
Score = 51.6 bits (118), Expect = 2e-06
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +2
Query: 149 SDIVSARIESCRGCSLNRLPQVKRFVMDDAPNYERLEVKFINGAPPXXXXXXXXXXXXXX 328
S + AR+E+C G LNRL +VK FV D P Y L +K + GA P
Sbjct: 35 SGLTRARVETCGGUQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELER 94
Query: 329 XXXXXXXXXXCNELVESRGFIKKSS 403
N LV+ GF +K++
Sbjct: 95 IPLSEMTREEINALVQELGFYRKAA 119
>BC016359-1|AAH16359.3| 165|Homo sapiens 15 kDa selenoprotein
protein.
Length = 165
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 80 FETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 129
>BC005294-1|AAH05294.3| 165|Homo sapiens 15 kDa selenoprotein
protein.
Length = 165
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 80 FETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 129
>AL121989-1|CAC04186.1| 162|Homo sapiens dJ604K5.1 (15 kDa
selenoprotein) protein.
Length = 162
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 77 FETKKLYAGAILEVCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 126
>AF288992-1|AAG31557.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 77 FETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 126
>AF288991-1|AAG31556.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 77 FETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 126
>AF267982-1|AAF78966.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 77 FETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 126
>AF051894-1|AAC15478.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 YDTSDIVSARIESCRGCSLNRLPQVKRFVMDDAPN-YERLEVKFINGAPP 286
++T + + I G L R PQV+ FV D P + L++K++ G+ P
Sbjct: 77 FETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDP 126
>BC039197-1|AAH39197.1| 395|Homo sapiens MLL2 protein protein.
Length = 395
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 200 GSTNTPYSSQFSQKLYLKYHMHLKRQWQGPVLL 102
G TNTPYS QF +Y L+ +W+ V L
Sbjct: 228 GETNTPYSKQFVHSKSSQYR-RLRTEWKNNVYL 259
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 200 GSTNTPYSSQFSQKLYLKYHMHLKRQWQGPVLL 102
G TNTPYS QF +Y L+ +W+ V L
Sbjct: 4790 GETNTPYSKQFVHSKSSQYR-RLRTEWKNNVYL 4821
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 200 GSTNTPYSSQFSQKLYLKYHMHLKRQWQGPVLL 102
G TNTPYS QF +Y L+ +W+ V L
Sbjct: 5095 GETNTPYSKQFVHSKSSQYR-RLRTEWKNNVYL 5126
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 200 GSTNTPYSSQFSQKLYLKYHMHLKRQWQGPVLL 102
G TNTPYS QF +Y L+ +W+ V L
Sbjct: 2537 GETNTPYSKQFVHSKSSQYR-RLRTEWKNNVYL 2568
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,324,300
Number of Sequences: 237096
Number of extensions: 1094112
Number of successful extensions: 1624
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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