Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_E07
(396 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 169 1e-42
M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 169 2e-42
BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 169 2e-42
AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 169 2e-42
AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 169 2e-42
AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 169 2e-42
AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 169 2e-42
M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin recept... 141 3e-34
AY118848-1|AAM50708.1| 92|Drosophila melanogaster GM15484p pro... 55 3e-08
AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA... 33 0.10
AY071146-1|AAL48768.1| 528|Drosophila melanogaster RE18076p pro... 32 0.32
AE014296-332|AAF47548.2| 528|Drosophila melanogaster CG12011-PA... 32 0.32
AE014298-574|ABC67172.1| 1059|Drosophila melanogaster CG32776-PD... 30 1.3
AE014298-573|AAS72338.2| 1058|Drosophila melanogaster CG32776-PB... 30 1.3
AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-P... 28 3.9
X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ... 27 6.8
BT022905-1|AAY55321.1| 490|Drosophila melanogaster IP12634p pro... 27 6.8
BT022223-1|AAY54639.1| 486|Drosophila melanogaster IP12434p pro... 27 6.8
AF151523-1|AAD46771.1| 425|Drosophila melanogaster hairy and en... 27 6.8
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote... 27 6.8
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ... 27 6.8
AE014297-2657|AAF55664.1| 547|Drosophila melanogaster CG3739-PA... 27 6.8
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB... 27 6.8
AE013599-566|AAF59152.2| 425|Drosophila melanogaster CG11194-PA... 27 6.8
BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p pro... 27 9.0
AY095044-1|AAM11372.1| 349|Drosophila melanogaster LD30509p pro... 27 9.0
AF538714-1|AAN15143.1| 1255|Drosophila melanogaster histone deac... 27 9.0
AE014298-1706|AAF48107.1| 349|Drosophila melanogaster CG11802-P... 27 9.0
AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA... 27 9.0
>AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD,
isoform D protein.
Length = 313
Score = 169 bits (411), Expect = 1e-42
Identities = 77/116 (66%), Positives = 92/116 (79%)
Frame = +2
Query: 47 NATMSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEK 226
+ MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 41 HVNMSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEK 100
Query: 227 XXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 101 LQLAARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 156
>M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein.
Length = 270
Score = 169 bits (410), Expect = 2e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = +2
Query: 56 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 235
MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 60
Query: 236 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 113
>BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p
protein.
Length = 270
Score = 169 bits (410), Expect = 2e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = +2
Query: 56 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 235
MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 60
Query: 236 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 113
>AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p
protein.
Length = 270
Score = 169 bits (410), Expect = 2e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = +2
Query: 56 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 235
MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 60
Query: 236 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 113
>AL031027-8|CAA19839.1| 270|Drosophila melanogaster
EG:80H7.6,FBgn0003517;sta protein.
Length = 270
Score = 169 bits (410), Expect = 2e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = +2
Query: 56 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 235
MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 60
Query: 236 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 113
>AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB,
isoform B protein.
Length = 270
Score = 169 bits (410), Expect = 2e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = +2
Query: 56 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 235
MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 60
Query: 236 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 113
>AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA,
isoform A protein.
Length = 270
Score = 169 bits (410), Expect = 2e-42
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = +2
Query: 56 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 235
MSGGLD+L+L E+D+TKML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK
Sbjct: 1 MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQL 60
Query: 236 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
++P+D+FVISSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 AARAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 113
>M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin receptor
protein.
Length = 253
Score = 141 bits (342), Expect = 3e-34
Identities = 65/96 (67%), Positives = 75/96 (78%)
Frame = +2
Query: 107 MLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVI 286
ML ATTHLG+ENVNFQME YVYKRR DG +++NL +TWEK ++P+D+FVI
Sbjct: 1 MLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAIDNPSDIFVI 60
Query: 287 SSRAFGQRAVLKFAGHTGATPIAGRFTPGAFTNQIQ 394
SSR GQRAVLKFA +T TPIAGRFTPGAFTNQIQ
Sbjct: 61 SSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQ 96
>AY118848-1|AAM50708.1| 92|Drosophila melanogaster GM15484p
protein.
Length = 92
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/72 (41%), Positives = 35/72 (48%)
Frame = -1
Query: 225 FSHVRRRLITCVPSPRRL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAF 46
FS V RL PS RRL TY SIWKLTFS P+W S PPD++ +
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTW 80
Query: 45 VRVTTKRV*CHW 10
+ T R C W
Sbjct: 81 KELRTSR--CRW 90
>AE014298-1473|AAF46608.1| 2090|Drosophila melanogaster CG9817-PA
protein.
Length = 2090
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQ 237
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH Q
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQHPQ 1013
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQRVQAFPMYAED*LR 195
HQ+ + QQ + QQ+ QHA Q H Q H L +Q H Q P Y L
Sbjct: 964 HQQQHQQQHAQQLQHQQLQQQHA-QQHQQ--QQHHLHQQHQQLHHDPQQQHPQYHPHQLH 1020
Query: 194 AY 189
A+
Sbjct: 1021 AH 1022
>AY071146-1|AAL48768.1| 528|Drosophila melanogaster RE18076p
protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 250 NSTSSEYKLFPCTPKINYVRTVTTAFINVRLHL 152
N S Y FP PK+ YV V T+ NV HL
Sbjct: 204 NQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHL 236
>AE014296-332|AAF47548.2| 528|Drosophila melanogaster CG12011-PA
protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 250 NSTSSEYKLFPCTPKINYVRTVTTAFINVRLHL 152
N S Y FP PK+ YV V T+ NV HL
Sbjct: 204 NQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHL 236
>AE014298-574|ABC67172.1| 1059|Drosophila melanogaster CG32776-PD,
isoform D protein.
Length = 1059
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQRVQAFPMYAED 204
HQE +Q Q QQ QH Q + Q HQ +QQ Q+ Q YA+D
Sbjct: 225 HQELQFEQHQPHQSHQQQQLQHQQQHQLQHQQQHQQQQQYQQQQHQQ-QQHQQYADD 280
>AE014298-573|AAS72338.2| 1058|Drosophila melanogaster CG32776-PB,
isoform B protein.
Length = 1058
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQRVQAFPMYAED 204
HQE +Q Q QQ QH Q + Q HQ +QQ Q+ Q YA+D
Sbjct: 225 HQELQFEQHQPHQSHQQQQLQHQQQHQLQHQQQHQQQQQYQQQQHQQ-QQHQQYADD 280
>AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-PA,
isoform A protein.
Length = 1473
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQR 234
HQ+ + QQ +Q QQ QH Q H + Q HQ ++QQ +Q+
Sbjct: 1344 HQQHHHQQQQQQQHQQQQQQQHQQQQHQQQ-QQHQQQQHQQQQQQQK 1389
>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
protein protein.
Length = 2515
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 73 LACAQRGRCD*DACGDHPFGSGK 141
L C Q GRC+ DAC P G+
Sbjct: 466 LDCGQHGRCEGDACACDPEWGGE 488
>BT022905-1|AAY55321.1| 490|Drosophila melanogaster IP12634p
protein.
Length = 490
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 4 RGPVALYAFSRNSYKRNDVGRIRLACAQRGRCD*DACGDHPFGS 135
+G V Y +S+ +Y+ +D+ I C++ G PFGS
Sbjct: 341 KGAVGYYEWSKENYQDSDLPWIFQTCSEFGWFQSSGSRSQPFGS 384
>BT022223-1|AAY54639.1| 486|Drosophila melanogaster IP12434p
protein.
Length = 486
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 4 RGPVALYAFSRNSYKRNDVGRIRLACAQRGRCD*DACGDHPFGS 135
+G V Y +S+ +Y+ +D+ I C++ G PFGS
Sbjct: 337 KGAVGYYEWSKENYQDSDLPWIFQTCSEFGWFQSSGSRSQPFGS 380
>AF151523-1|AAD46771.1| 425|Drosophila melanogaster hairy and
enhancer of split relatedprotein 1 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 377 MHQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDP-PRRQQH 243
+H + + QQ +Q QQ QH Q H + Q Q P P +QQH
Sbjct: 302 LHSDSSSQQQQQQQQQQQQQQQHQQQQHQQQQQRTQTTPQPTQQQH 347
>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
protein.
Length = 2731
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 73 LACAQRGRCD*DACGDHPFGSGK 141
L C Q GRC+ DAC P G+
Sbjct: 682 LDCGQHGRCEGDACACDPEWGGE 704
>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
protein.
Length = 2731
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 73 LACAQRGRCD*DACGDHPFGSGK 141
L C Q GRC+ DAC P G+
Sbjct: 682 LDCGQHGRCEGDACACDPEWGGE 704
>AE014297-2657|AAF55664.1| 547|Drosophila melanogaster CG3739-PA
protein.
Length = 547
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 4 RGPVALYAFSRNSYKRNDVGRIRLACAQRGRCD*DACGDHPFGS 135
+G V Y +S+ +Y+ +D+ I C++ G PFGS
Sbjct: 398 KGAVGYYEWSKENYQDSDLPWIFQTCSEFGWFQSSGSRSQPFGS 441
>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
protein.
Length = 2731
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 73 LACAQRGRCD*DACGDHPFGSGK 141
L C Q GRC+ DAC P G+
Sbjct: 682 LDCGQHGRCEGDACACDPEWGGE 704
>AE013599-566|AAF59152.2| 425|Drosophila melanogaster CG11194-PA
protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 377 MHQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDP-PRRQQH 243
+H + + QQ +Q QQ QH Q H + Q Q P P +QQH
Sbjct: 302 LHSDSSSQQQQQQQQQQQQQQQHQQQQHQQQQQRTQTTPQPTQQQH 347
>BT012663-1|AAT08469.1| 1057|Drosophila melanogaster RE66582p
protein.
Length = 1057
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQH 243
HQ+ ++QQ +Q QQ QH Q H + Q HQ ++QQH
Sbjct: 87 HQQQHMQQQQQQQQHQQ---QHQQQQHQQQ-QQHQQQQQQQQQH 126
>AY095044-1|AAM11372.1| 349|Drosophila melanogaster LD30509p
protein.
Length = 349
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 388 LVSKCTRSETSSNWCCASVASKFKH 314
L++ CTR +T N C + VAS+ H
Sbjct: 225 LINICTRMQTHLNLCASYVASEQNH 249
>AF538714-1|AAN15143.1| 1255|Drosophila melanogaster histone
deacetylase dHDAC4 isoformb protein.
Length = 1255
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 314 QHAGQMHVMR*QTHQLDPPRRQQHEQRVQ 228
QH Q+H + Q HQ ++QQH+Q+ Q
Sbjct: 114 QHRQQLHQQQ-QQHQQQQQQQQQHQQQQQ 141
>AE014298-1706|AAF48107.1| 349|Drosophila melanogaster CG11802-PA
protein.
Length = 349
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 388 LVSKCTRSETSSNWCCASVASKFKH 314
L++ CTR +T N C + VAS+ H
Sbjct: 225 LINICTRMQTHLNLCASYVASEQNH 249
>AE014296-1456|AAF50415.2| 1039|Drosophila melanogaster CG7015-PA
protein.
Length = 1039
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 374 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQH 243
HQ+ ++QQ +Q QQ QH Q H + Q HQ ++QQH
Sbjct: 87 HQQQHMQQQQQQQQHQQ---QHQQQQHQQQ-QQHQQQQQQQQQH 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,859,998
Number of Sequences: 53049
Number of extensions: 350726
Number of successful extensions: 1052
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -