Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_E05
(401 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 167 3e-42
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 167 4e-42
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 167 4e-42
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 163 5e-41
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 155 2e-38
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 126 9e-30
08_02_0383 - 16539472-16539633,16543044-16543205 44 6e-05
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 35 0.021
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 29 1.4
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 1.4
01_05_0586 + 23443371-23444645 29 1.4
11_06_0289 - 21969248-21973516 28 3.2
11_06_0185 + 21018045-21022307 28 3.2
03_06_0410 - 33728507-33729415,33729511-33729654,33730054-337309... 28 3.2
01_05_0509 + 22811184-22812038,22813493-22814020 28 3.2
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 27 5.6
04_03_0631 - 18190195-18190686,18190866-18191066 27 5.6
11_02_0084 + 8142489-8142540,8142703-8142812,8143026-8143251,815... 27 7.3
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597... 27 7.3
02_02_0473 - 10727908-10728052,10728367-10728440,10728660-107288... 27 7.3
01_01_0540 + 3957622-3960903 27 7.3
10_02_0105 - 5345149-5347833 26 9.7
04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-92... 26 9.7
01_05_0584 + 23435620-23436408,23436966-23437508 26 9.7
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 167 bits (406), Expect = 3e-42
Identities = 86/143 (60%), Positives = 101/143 (70%), Gaps = 12/143 (8%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLNRKGGMKRKDM-----RHSKNVGLGFKTPREAVEGTYIDKKCPF 173
A+QTE+AF KQ VFL K K K R KN+GLGFKTPREA+EGTYIDKKCPF
Sbjct: 2 AEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPF 61
Query: 174 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR-------FEKRHRNMSVHLSP 332
TG VSIRGRI+ G KM RTI++RR+YLH++ KY R +EKRH N+ H+SP
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHISP 121
Query: 333 CFRDVEIGDIVTIGECRPLSKTV 401
CFR V+ GD V IG+CRPLSKTV
Sbjct: 122 CFR-VKEGDHVIIGQCRPLSKTV 143
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 167 bits (405), Expect = 4e-42
Identities = 86/145 (59%), Positives = 104/145 (71%), Gaps = 14/145 (9%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLN-RKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPF 173
A+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREA+EGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 174 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVHL 326
TG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H+
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHV 121
Query: 327 SPCFRDVEIGDIVTIGECRPLSKTV 401
SPCFR V+ GD V IG+CRPLSKTV
Sbjct: 122 SPCFR-VKEGDHVIIGQCRPLSKTV 145
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 167 bits (405), Expect = 4e-42
Identities = 86/145 (59%), Positives = 104/145 (71%), Gaps = 14/145 (9%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLN-RKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPF 173
A+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREA+EGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 174 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVHL 326
TG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H+
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHV 121
Query: 327 SPCFRDVEIGDIVTIGECRPLSKTV 401
SPCFR V+ GD V IG+CRPLSKTV
Sbjct: 122 SPCFR-VKEGDHVIIGQCRPLSKTV 145
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 163 bits (396), Expect = 5e-41
Identities = 77/126 (61%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Frame = +3
Query: 36 KQATVFLNRKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRI 203
+Q F +K G +K R KN+GLGFKTPREA+EGTYIDKKCPFTG VSIRGRI
Sbjct: 3 EQVLDFSPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRI 62
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
+ G KM RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V IG+CR
Sbjct: 63 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCR 121
Query: 384 PLSKTV 401
PLSKTV
Sbjct: 122 PLSKTV 127
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 155 bits (375), Expect = 2e-38
Identities = 86/160 (53%), Positives = 104/160 (65%), Gaps = 29/160 (18%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLN-RKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPF 173
A+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREA+EGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 174 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------------------- 287
TG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDL 121
Query: 288 --RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTV 401
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTV
Sbjct: 122 GCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTV 160
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 126 bits (303), Expect = 9e-30
Identities = 61/99 (61%), Positives = 74/99 (74%), Gaps = 5/99 (5%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLN-RKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPF 173
A+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREA+EGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 174 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 290
TG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 43.6 bits (98), Expect = 6e-05
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
+ G+V KMQ+++V+ D L + YNR+ KR H D IGD V + R
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61
Query: 384 PLSK 395
PLSK
Sbjct: 62 PLSK 65
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 35.1 bits (77), Expect = 0.021
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
LTG V K +T+ + L PKY R E+ + H P ++GD+V + R
Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029
Query: 384 PLSKT 398
P+SKT
Sbjct: 1030 PISKT 1034
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 57 NRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGR 200
N G ++RH+ ++G E T +DK+ P +G S+ GR
Sbjct: 117 NLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGR 164
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 138 VEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 284
V GT PFTG++S G + + KM + +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
>01_05_0586 + 23443371-23444645
Length = 424
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 250 SGAIISITCLNTTDLRSDTGTCLFIYRLASGTWKS 354
+GA S TCLN T+ S G Y ++ G W S
Sbjct: 35 TGASFSRTCLNLTNAVSGIGVLSMPYAVSQGGWLS 69
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 216 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 350
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1251 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1295
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 216 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 350
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1249 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1293
>03_06_0410 -
33728507-33729415,33729511-33729654,33730054-33730920,
33731371-33731913
Length = 820
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 209 CQDTASDGHVTREWTFLINVCAFNGLTGCLET*TNILRMSHILPFHAPLAIE 54
C + + HV W+ + CAF GL E R I+PFHAP + +
Sbjct: 357 CLNYLTSPHVVI-WSAVTASCAFPGLFEAQELMAKN-RFGEIVPFHAPFSTD 406
>01_05_0509 + 22811184-22812038,22813493-22814020
Length = 460
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 247 LSGAIISITCLNTTDLRSDTGTCLFIYRLASGTWKSETSSQLASA 381
++GA +CLN +++ S G Y L+ G W S T + A
Sbjct: 65 MTGASFGRSCLNLSNIISGIGMLSVPYALSQGGWLSLTLFTMVGA 109
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 200 YPDRRCSENENAANNCYQARLSPLPA*IQQI*EATQEHVCSSIAL 334
Y DRR ++E A Y+A+LS + Q + E T + +S A+
Sbjct: 205 YLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAV 249
>04_03_0631 - 18190195-18190686,18190866-18191066
Length = 230
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 289 DLRSDTGTCLFIYR-LASGTWKSETSSQLASA 381
D +S TGTC F+ R L S ++K + S L++A
Sbjct: 87 DRKSTTGTCQFLGRSLVSWSFKKQNSIALSTA 118
>11_02_0084 +
8142489-8142540,8142703-8142812,8143026-8143251,
8156316-8156488,8156649-8157158
Length = 356
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +3
Query: 6 RADQTEKAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNV 185
R D ++Q FL+ G R + H+ G EA++GT+I
Sbjct: 16 REDTIHMCIEEQVATFLHTVGYNLRNRLVHTNYDRSGETDCIEAIDGTHIRASVRKNVES 75
Query: 186 SIRGR 200
S RGR
Sbjct: 76 SFRGR 80
>09_06_0204 -
21559024-21559287,21559445-21559567,21559665-21559718,
21559800-21560721,21560803-21561212,21561284-21561408,
21561524-21561571,21561668-21561789,21562008-21562099,
21562242-21562429,21562582-21562696,21562780-21562863,
21562994-21563087,21563393-21563510,21563805-21563930,
21564002-21564074,21564209-21564296,21564674-21564744,
21564839-21564918,21565004-21565065,21565169-21565310,
21565410-21565510,21565600-21565644,21565725-21565789,
21566088-21566163,21566246-21566300,21566416-21566773
Length = 1366
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 276 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 374
P+Y +K R+ S+ + C+ +I D+V +G
Sbjct: 197 PEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVG 229
>02_02_0473 - 10727908-10728052,10728367-10728440,10728660-10728818,
10729606-10729774,10730216-10730355,10730469-10730879,
10731055-10731334,10731508-10731571,10731995-10733281,
10733363-10733822,10733988-10734356
Length = 1185
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 213 RLSGYGLGWTRYP*MDISYQCMCLQR 136
R S YG G+ R D+ Y+C+ L R
Sbjct: 994 RTSTYGTGFARISSWDLRYRCLFLSR 1019
>01_01_0540 + 3957622-3960903
Length = 1093
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 250 SGAIISITCLNTTDLRSDTGTCLFIYRLASGTWKSETSSQLASAG 384
SG + + CL + CL++ S T +S T Q+ S G
Sbjct: 432 SGQLCMVACLGVGAKACHSRVCLYLQTTFSATRRSITVGQITSIG 476
>10_02_0105 - 5345149-5347833
Length = 894
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 246 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 350
VIR++ +YNR+ + + S P FR+ E
Sbjct: 113 VIRKEISEIFERYNRYNAVNSSTSTEAQPIFREDE 147
>04_01_0084 - 912255-912368,912738-912822,914050-917105,920290-920508
Length = 1157
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 172 NGHFLSMYVPSTASRGVLK--PRPTFL-ECLISFLFMPPLRLRNTVAC 38
NGH S+YVP T SR K PR + L + ++ F P L+ VAC
Sbjct: 1066 NGHHPSLYVP-THSRYYKKKLPRGSMLSDMILCFEVKPSAILQWRVAC 1112
>01_05_0584 + 23435620-23436408,23436966-23437508
Length = 443
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 247 LSGAIISITCLNTTDLRSDTGTCLFIYRLASGTWKS 354
++GA +CLN +++ S G Y L+ G W S
Sbjct: 43 ITGASFGRSCLNLSNVISGIGMLSVPYALSQGGWLS 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,058,413
Number of Sequences: 37544
Number of extensions: 262214
Number of successful extensions: 681
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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