Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_E04
(596 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 180 1e-45
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 113 1e-25
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 106 1e-23
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 102 2e-22
10_08_0620 - 19321612-19323237 99 2e-21
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 95 4e-20
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 84 7e-17
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 84 9e-17
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 78 5e-15
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 62 4e-10
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 54 9e-08
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 47 1e-05
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 46 2e-05
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 37 0.011
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 33 0.17
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 2.8
01_07_0317 + 42699035-42699305,42699411-42700132 29 3.7
12_02_0134 - 14071190-14071435,14071800-14071988,14072114-140721... 28 4.9
01_07_0315 - 42692539-42693260,42693357-42693609 28 4.9
01_07_0316 - 42696640-42697361,42697505-42697733 28 6.5
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 180 bits (437), Expect = 1e-45
Identities = 100/204 (49%), Positives = 127/204 (62%), Gaps = 20/204 (9%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 224
+ +LNP AE+ S AL +NI+AAKG+QDV+KTNLGPKGT+KMLV GAGDIK+TKDGN L
Sbjct: 3 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTL 62
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
L EMQIQ+PTA +IAR VL IGEL+KQ++ + EG HPR + +G+
Sbjct: 63 LKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGF 122
Query: 405 DIARNKALEILDSMKIPI----EIKRENLLDIASTSLKTKVHA----------------S 524
D+A+ LE L+ K + E RE L IA T+L+TKV A
Sbjct: 123 DVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKVGAVCFLAFKLSLLGQLYEG 182
Query: 525 LATVLTDACVDAVLSIRSPGKPVD 596
LA LTD V+AVL IR P +P+D
Sbjct: 183 LADQLTDIVVNAVLCIRKPDEPID 206
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 113 bits (272), Expect = 1e-25
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Frame = +3
Query: 78 RASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTA 257
R +NI+AA+ + D ++T+LGP+G KM+ SG ++ IT DG +L M + P A
Sbjct: 23 RRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAA 82
Query: 258 SLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEIL 437
++A V+L G LL++A +S G HP + +A+E+L
Sbjct: 83 RMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVL 142
Query: 438 DSMKIPIEIK-RENLLDIASTSLKTKVHASLATVLTDACVDAVLSIRSPGKP 590
+M IPIE+ R++L+ AST+L +KV + +++L+ VDA LS+ P P
Sbjct: 143 HAMAIPIELSDRDSLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHP 194
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 106 bits (255), Expect = 1e-23
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 281
NI AAK + D+++T LGP+ +KML+ AG I +T DGN +L E+ + HP A +
Sbjct: 26 NIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHPAAKSMIELSR 85
Query: 282 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIE 461
++L GE+L A ++ + HP +I Y A + AL +LD + IP++
Sbjct: 86 TQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVD 145
Query: 462 I-KRENLLDIASTSLKTKVHASLATVLTDACVDA 560
+ R +L + +S+ TK ++ D +DA
Sbjct: 146 VDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDA 179
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 102 bits (244), Expect = 2e-22
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Frame = +3
Query: 36 NGCISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 215
N + +L + ++ NI AAK + D+++T LGP+ +KML+ +G I +T DG
Sbjct: 4 NAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDG 63
Query: 216 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIIT 395
N +L E+ I HP A + ++L GE+L A+ ++ + HP +I
Sbjct: 64 NAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVIC 123
Query: 396 EGYDIARNKALEILDSMKIPIEIK-RENLLDIASTSLKTKVHASLATVLTDACVDA 560
Y A AL +LD + + +++ R +L + +S+ TK ++ D +DA
Sbjct: 124 RAYTKALEDALAVLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDA 179
>10_08_0620 - 19321612-19323237
Length = 541
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Frame = +3
Query: 78 RASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGA--GD--IKITKDGNVLLHEMQIQ 245
R +NI+A + + +T+LGP+G KM+ S + GD + IT DG +L M +
Sbjct: 23 RRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLL 82
Query: 246 HPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKA 425
P A ++A V+L G LL++A +S G HP + + +A
Sbjct: 83 QPAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARA 142
Query: 426 LEILDSMKIPIEIK-RENLLDIASTSLKTKVHASLATVLTDACVDAVLSIRSPGKP 590
+E+L M IP+E+ R+ L+ AST+L +KV + +T+L+ VDA L++ P P
Sbjct: 143 VEVLHGMAIPVELSDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHP 198
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 95.1 bits (226), Expect = 4e-20
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Frame = +3
Query: 63 KAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQI 242
K R A NI+A K + +++T+LGPKG KML S GD+ IT DG +L +M +
Sbjct: 20 KKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV 79
Query: 243 QHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNK 422
+ A L+ V++ G LL+QA+ + G+HP I EGY++A
Sbjct: 80 DNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRI 139
Query: 423 ALEILDSMKIPIEIKREN---LLDIASTSLKTKVHASLATVLTDACVDAVLSI 572
A + L+ + E N L+ T+L +K+ L + V AVL++
Sbjct: 140 AFDHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAV 192
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 84.2 bits (199), Expect = 7e-17
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Frame = +3
Query: 51 LLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVS-GAG-DIKITKDGNVL 224
+L A + +A A I D++KT LGPKG K+L S G G + +T DG +
Sbjct: 4 VLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 63
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
L + I +P A ++ V+L GELL++A+ V+ +HP I GY
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGY 123
Query: 405 ----DIARNKALEILDSMKIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSI 572
+ ARN LE K I+ R +L++IA T+L +K+ + + VDAVL +
Sbjct: 124 RMAVECARNALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVLRL 183
Query: 573 R 575
+
Sbjct: 184 K 184
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 83.8 bits (198), Expect = 9e-17
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 224
I LL + ++ + NI+A + D ++T LGP+G K++ G I+ DG +
Sbjct: 9 IILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATI 68
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
+ + I HP A ++ VLL E LK+A Y+ +G+HP + Y
Sbjct: 69 MRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSY 128
Query: 405 DIARNKALEILDSMKIPI-----EIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 569
A + A+E + + I E K+E L A+T+L +K+ VDAVL+
Sbjct: 129 RTAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLA 188
Query: 570 I 572
I
Sbjct: 189 I 189
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/125 (29%), Positives = 66/125 (52%)
Frame = +3
Query: 72 LARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 251
L+ +A+ NI A + + + +T+LGP G KM+++ + +T D +++E+++QHP
Sbjct: 17 LSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP 76
Query: 252 TASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALE 431
A ++ + GELL++A+ + GLHP I GY A NK +E
Sbjct: 77 AAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVE 136
Query: 432 ILDSM 446
IL+ +
Sbjct: 137 ILEDL 141
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 61.7 bits (143), Expect = 4e-10
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Frame = +3
Query: 51 LLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVS-GAG-DIKITKDGNVL 224
LL A + +A + I D++KT LGPKG K+L S G G + +T DG +
Sbjct: 5 LLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 64
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
L + I +P A ++ V+L GELL++A+ V+ +HP I
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI---- 120
Query: 405 DIARNKALEILDSMKIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSIR 575
I D R +L++IA T+L +K+ + VDAVL ++
Sbjct: 121 ---------IADKF-------RSDLMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLK 161
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 171 MLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQ 350
MLV GD+ IT DG +L ++++HP A ++ V++ ELLK+
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 351 ADIYVSEGLHPRIITEGYDIARN 419
+ V +HP I GY + N
Sbjct: 61 GNDLVRNKIHPTSIISGYRLQYN 83
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 47.2 bits (107), Expect = 1e-05
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Frame = +3
Query: 42 CISLLNPKAELARASQALAVNI--SAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 215
C +N EL LA+ + + D++ LGPKG +L S G KI DG
Sbjct: 46 CNFRVNAAKELYFNKDGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDG 105
Query: 216 NVLLHEMQIQHPT----ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHP 383
+ E++++ P A L+ + V+L ++ + V+ G +P
Sbjct: 106 VTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANP 165
Query: 384 RIITEGYDIARNKALEILDSMKIPIEIKRENLLDIASTS 500
IT G + KAL + + K+ E++ L D+A+ S
Sbjct: 166 VQITRGIE-KTAKAL-VSELQKMSKEVEDSELADVAAVS 202
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Frame = +3
Query: 123 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 290
+ D++ LGPKG +L S G +I DG + E++++ P A L+ +
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 138
Query: 291 XXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIEIKR 470
V+L L+ + V+ G +P IT G + +E L K+ E++
Sbjct: 139 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEEL--KKLSKEVED 196
Query: 471 ENLLDIASTS 500
L D+A+ S
Sbjct: 197 SELADVAAVS 206
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQ----IQHPT 254
+A A+ + + + D +K +GPKG ++ G K+TKDG + ++ +++
Sbjct: 80 EARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVG 139
Query: 255 ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEI 434
ASL+ + +L + + V+ G++ + G +A ++ +
Sbjct: 140 ASLVKQVANATNDTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVDEVVTN 199
Query: 435 LDSMKIPIEIKRE 473
L M I E
Sbjct: 200 LKGMARMISTSEE 212
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 33.1 bits (72), Expect = 0.17
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Frame = +3
Query: 6 RGFLLAT-LTRNGCISLLNPKAELARASQALAVNISAA--KGIQDV---MKTNLGPKGTM 167
RG LLA L+R GC A A V AA +G+ D+ +K +GPKG
Sbjct: 94 RGLLLARQLSRGGCGEQRLWARGYAAKEVAFGVGARAALLQGVNDLADAVKVTMGPKGRN 153
Query: 168 KMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXXXXXXXXXXXXVLLIG 335
++ K+TKDG + ++ + A+L+ + +L
Sbjct: 154 VIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAGDGTTCATVLTQ 213
Query: 336 ELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIEIKRE-NLLDIASTSLKTK 512
+L + V+ G++ + G + A + L S I E N + S + + +
Sbjct: 214 AILTEGCKAVAAGVNVMDLRNGINKAISSITTHLKSKAWIINSSEEINQVATISANGEKE 273
Query: 513 VHASLATVLTDACVDAVLSIRSPGKPVD 596
+ ++ + D V++I + GK +D
Sbjct: 274 IGDLISKAMEKVGKDGVITI-TDGKTLD 300
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 108 SAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
SAA G++ V + L K+ V GD K D +V+ ++ ++PT SL+
Sbjct: 37 SAASGVETVPQLFLKISPEGKVPVFNGGDGKWIPDSDVITQVIEEKYPTPSLV 89
>01_07_0317 + 42699035-42699305,42699411-42700132
Length = 330
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 595 STGLPGLRIERTASTHASVSTVARLA*TF-VLSEVLAISSKFSRLISIGIFIESKIS 428
S +PGL + RTA+T+A +LA F +++ V+ I+ SR+ + G+ E ++
Sbjct: 202 SAAVPGLTVTRTAATNA---VRVQLAGVFDIMANVVPITEHDSRIHNYGVTEEDSLA 255
>12_02_0134 -
14071190-14071435,14071800-14071988,14072114-14072194,
14072261-14072404,14072528-14072761,14072836-14073981,
14074863-14074922,14075178-14075420,14075509-14075607,
14076196-14076367,14076597-14076735,14077514-14077624,
14077695-14077797,14077885-14077962,14078054-14078122,
14078203-14078275,14078891-14078975,14079473-14079536,
14079963-14080073,14080139-14080213,14080306-14080398,
14080982-14081056,14081172-14081261
Length = 1259
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -2
Query: 487 ISSKFSRLISIGIFI--ESKISSALLRAMS*PSVIILGCRPSLT*ISACLRSSPMSN 323
+S FS L G ++ ESK +S +S P +++ C +L I+ACL+S S+
Sbjct: 618 VSDMFSLLSLCGSYLNKESKQNSNQKCRLSNPHALVVHCCLALATIAACLKSEGNSS 674
>01_07_0315 - 42692539-42693260,42693357-42693609
Length = 324
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = -2
Query: 595 STGLPGLRIERTASTHASVSTVARLA*TFVLSEVLAISSKFSRLISIGIFIESKIS 428
S +PGL + RTA+T+A +A + +++ V+ I+ + SR+ + G+ E ++
Sbjct: 196 SAAVPGLTVTRTAATNAVRVQLAGV--LDIMANVVPITEQDSRIHNYGVTEEDSLA 249
>01_07_0316 - 42696640-42697361,42697505-42697733
Length = 316
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -2
Query: 595 STGLPGLRIERTASTHASVSTVARLA*TF-VLSEVLAISSKFSRLISIGIFIESKIS 428
S +PGL + RTA+T+ +LA F +++ V+ I+ + SR+ + G+ E ++
Sbjct: 188 SAAVPGLTVTRTAATN---GVRVQLAGVFDIMANVVPITEQDSRIHNYGVTEEDSLA 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,955,508
Number of Sequences: 37544
Number of extensions: 247875
Number of successful extensions: 540
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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