Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_E04
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 218 2e-57
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 218 2e-57
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 116 1e-26
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 116 1e-26
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 113 1e-25
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 93 1e-19
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 93 1e-19
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 90 1e-18
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 90 1e-18
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 90 1e-18
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 81 8e-16
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 79 2e-15
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 79 2e-15
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 69 3e-12
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.47
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.47
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 218 bits (533), Expect = 2e-57
Identities = 106/184 (57%), Positives = 135/184 (73%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 224
I LNPKAELAR + AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDGNVL
Sbjct: 4 IQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVL 63
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
LHEM IQHPTAS+IA+ VLLIGELLKQA+ V EGLHPRI+TEG+
Sbjct: 64 LHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Query: 405 DIARNKALEILDSMKIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSIRSPG 584
+ A K LE+L+ K ++R+ L+++ T+L+TK+H LA +T+ VDAVL+IR G
Sbjct: 124 EWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDG 183
Query: 585 KPVD 596
+ D
Sbjct: 184 EEPD 187
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 218 bits (533), Expect = 2e-57
Identities = 106/184 (57%), Positives = 135/184 (73%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 224
I LNPKAELAR + AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDGNVL
Sbjct: 4 IQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVL 63
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
LHEM IQHPTAS+IA+ VLLIGELLKQA+ V EGLHPRI+TEG+
Sbjct: 64 LHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Query: 405 DIARNKALEILDSMKIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSIRSPG 584
+ A K LE+L+ K ++R+ L+++ T+L+TK+H LA +T+ VDAVL+IR G
Sbjct: 124 EWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDG 183
Query: 585 KPVD 596
+ D
Sbjct: 184 EEPD 187
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 116 bits (279), Expect = 1e-26
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 267 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 446
V+L G LL++A+ + G+HP I +G+D+A KALE LDS+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 447 --KIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSI 572
K P+E RE L++ A TSL +K+ + VDAVLS+
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 116 bits (279), Expect = 1e-26
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 267 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 446
V+L G LL++A+ + G+HP I +G+D+A KALE LDS+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 447 --KIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSI 572
K P+E RE L++ A TSL +K+ + VDAVLS+
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 116 bits (279), Expect = 1e-26
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 267 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 446
V+L G LL++A+ + G+HP I +G+D+A KALE LDS+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 447 --KIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSI 572
K P+E RE L++ A TSL +K+ + VDAVLS+
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 113 bits (271), Expect = 1e-25
Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 281
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 282 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIE 461
V++ G LL A +S+G+HP I+E + A +A +ILD M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 462 IKRENLLD-IASTSLKTKVHASLATVLTDACVDAVLSI 572
+ + LL+ +A+TSL +KV + + +L V+AV I
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 113 bits (271), Expect = 1e-25
Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 281
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 282 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIE 461
V++ G LL A +S+G+HP I+E + A +A +ILD M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 462 IKRENLLD-IASTSLKTKVHASLATVLTDACVDAVLSI 572
+ + LL+ +A+TSL +KV + + +L V+AV I
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 93.1 bits (221), Expect = 1e-19
Identities = 48/160 (30%), Positives = 89/160 (55%), Gaps = 2/160 (1%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 281
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 282 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALE-ILDSMKIPI 458
V++ ELLK+AD V + +HP I GY +A +A++ I +++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 459 E-IKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSIR 575
+ I R+++++ A TS+ +K+ A + VDA ++R
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVR 184
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 93.1 bits (221), Expect = 1e-19
Identities = 48/160 (30%), Positives = 89/160 (55%), Gaps = 2/160 (1%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 281
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 282 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALE-ILDSMKIPI 458
V++ ELLK+AD V + +HP I GY +A +A++ I +++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 459 E-IKRENLLDIASTSLKTKVHASLATVLTDACVDAVLSIR 575
+ I R+++++ A TS+ +K+ A + VDA ++R
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVR 184
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 90.2 bits (214), Expect = 1e-18
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKITKD 212
+ +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+T D
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 213 GNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRII 392
G +L + + +P A ++ +L ELLK+A+ V++ +HP+ I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 393 TEGYDIARNKALEILDSMKIPI-EIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 569
GY A A E L I + R++LL IA T+L +K+ + VDAVL
Sbjct: 124 ISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLR 183
Query: 570 IRSPG 584
++ G
Sbjct: 184 LKGSG 188
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 90.2 bits (214), Expect = 1e-18
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKITKD 212
+ +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+T D
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 213 GNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRII 392
G +L + + +P A ++ +L ELLK+A+ V++ +HP+ I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 393 TEGYDIARNKALEILDSMKIPI-EIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 569
GY A A E L I + R++LL IA T+L +K+ + VDAVL
Sbjct: 124 ISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLR 183
Query: 570 IRSPG 584
++ G
Sbjct: 184 LKGSG 188
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 90.2 bits (214), Expect = 1e-18
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKITKD 212
+ +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+T D
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 213 GNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRII 392
G +L + + +P A ++ +L ELLK+A+ V++ +HP+ I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 393 TEGYDIARNKALEILDSMKIPI-EIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 569
GY A A E L I + R++LL IA T+L +K+ + VDAVL
Sbjct: 124 ISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLR 183
Query: 570 IRSPG 584
++ G
Sbjct: 184 LKGSG 188
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 80.6 bits (190), Expect = 8e-16
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Frame = +3
Query: 102 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 281
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 282 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDS-MKIPI 458
++L GE++ A Y+ + HP +I + Y A ++ ++ +
Sbjct: 88 TQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKFSKTV 147
Query: 459 EIKRE-NLLDIASTSLKTKVHASLATVLTDACVDAVLSIR 575
+I + + + + L TK+ + + + + AV +IR
Sbjct: 148 DITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIR 187
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 224
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
L + I P AS + V+L E+LKQ ++ +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 405 DIARNKALEILDSMKIPIEIK---RENLLDIASTSLKTKVHASLATVLTDACVDAV 563
A K L+ L ++I I + RE L+ A+T+L +K+ + + VDAV
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAV 181
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Frame = +3
Query: 45 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 224
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 225 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 404
L + I P AS + V+L E+LKQ ++ +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 405 DIARNKALEILDSMKIPIEIK---RENLLDIASTSLKTKVHASLATVLTDACVDAV 563
A K L+ L ++I I + RE L+ A+T+L +K+ + + VDAV
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAV 181
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 68.5 bits (160), Expect = 3e-12
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Frame = +3
Query: 87 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 266
+A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP A +I
Sbjct: 26 EAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARII 85
Query: 267 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 446
V+L LL+ A + G+ P+ + GY+ A KALEIL ++
Sbjct: 86 IMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTL 145
Query: 447 KIPIEIKRENLLDI------ASTSLKTKVHASLATVLTDACV 554
+ +N+ ++ A TS + +A ++ ACV
Sbjct: 146 VVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACV 187
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 75 ARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 254
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 255 ASLIAR 272
+L A+
Sbjct: 82 QNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 75 ARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 254
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 255 ASLIAR 272
+L A+
Sbjct: 82 QNLGAK 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,181,920
Number of Sequences: 27780
Number of extensions: 226422
Number of successful extensions: 618
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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