Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D23
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical pr... 128 2e-30
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 126 7e-30
Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical pr... 126 7e-30
Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical pr... 124 2e-29
Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical pr... 120 5e-28
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 32 0.17
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 32 0.17
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 30 0.89
AL132848-2|CAB60385.2| 333|Caenorhabditis elegans Hypothetical ... 28 2.7
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 28 3.6
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 28 3.6
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 27 6.3
>Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical
protein F25H5.3c protein.
Length = 531
Score = 128 bits (308), Expect = 2e-30
Identities = 64/112 (57%), Positives = 78/112 (69%)
Frame = +3
Query: 114 DKPGQQLAAANVGSQLQHMCGLDIDSKASYVRLSGIICTIGPASRDVTMLEKMMETGMNV 293
DK Q+LAA + ++H+C LDI VR +GIICTIGPA V ML+K++ GMN+
Sbjct: 16 DKQEQKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNI 75
Query: 294 ARMNFSHGSHEYHAETIRNCREAEKNYSAKLGTPFSLAIALDTKGPEIRTGL 449
AR+NFSHGSHEYHA TI N REA ++S K + IALDTKGPEIRTGL
Sbjct: 76 ARLNFSHGSHEYHAGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGL 123
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 126 bits (304), Expect = 7e-30
Identities = 65/120 (54%), Positives = 79/120 (65%)
Frame = +3
Query: 90 EMAFTGSADKPGQQLAAANVGSQLQHMCGLDIDSKASYVRLSGIICTIGPASRDVTMLEK 269
E G K Q+LAA + ++H+C LDI VR +GIICTIGPA V ML+K
Sbjct: 35 EEEHAGDYFKQEQKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQK 94
Query: 270 MMETGMNVARMNFSHGSHEYHAETIRNCREAEKNYSAKLGTPFSLAIALDTKGPEIRTGL 449
++ GMN+AR+NFSHGSHEYHA TI N REA ++S K + IALDTKGPEIRTGL
Sbjct: 95 LILNGMNIARLNFSHGSHEYHAGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGL 150
>Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical
protein F25H5.3a protein.
Length = 562
Score = 126 bits (304), Expect = 7e-30
Identities = 65/120 (54%), Positives = 79/120 (65%)
Frame = +3
Query: 90 EMAFTGSADKPGQQLAAANVGSQLQHMCGLDIDSKASYVRLSGIICTIGPASRDVTMLEK 269
E G K Q+LAA + ++H+C LDI VR +GIICTIGPA V ML+K
Sbjct: 39 EEEHAGDYFKQEQKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQK 98
Query: 270 MMETGMNVARMNFSHGSHEYHAETIRNCREAEKNYSAKLGTPFSLAIALDTKGPEIRTGL 449
++ GMN+AR+NFSHGSHEYHA TI N REA ++S K + IALDTKGPEIRTGL
Sbjct: 99 LILNGMNIARLNFSHGSHEYHAGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGL 154
>Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical
protein F25H5.3b protein.
Length = 600
Score = 124 bits (300), Expect = 2e-29
Identities = 62/108 (57%), Positives = 76/108 (70%)
Frame = +3
Query: 126 QQLAAANVGSQLQHMCGLDIDSKASYVRLSGIICTIGPASRDVTMLEKMMETGMNVARMN 305
Q+LAA + ++H+C LDI VR +GIICTIGPA V ML+K++ GMN+AR+N
Sbjct: 89 QKLAAVPATTHMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLN 148
Query: 306 FSHGSHEYHAETIRNCREAEKNYSAKLGTPFSLAIALDTKGPEIRTGL 449
FSHGSHEYHA TI N REA ++S K + IALDTKGPEIRTGL
Sbjct: 149 FSHGSHEYHAGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGL 192
>Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical
protein ZK593.1 protein.
Length = 515
Score = 120 bits (289), Expect = 5e-28
Identities = 56/99 (56%), Positives = 70/99 (70%)
Frame = +3
Query: 153 SQLQHMCGLDIDSKASYVRLSGIICTIGPASRDVTMLEKMMETGMNVARMNFSHGSHEYH 332
+ + H+CGL I + R +G+ICTIGPA DV L KM+ TGMN+AR+NFSHG+HE H
Sbjct: 16 TNISHLCGLRISERPQKTRKTGVICTIGPACSDVETLRKMINTGMNIARLNFSHGTHEAH 75
Query: 333 AETIRNCREAEKNYSAKLGTPFSLAIALDTKGPEIRTGL 449
A TI+ REA +N PF +AIALDTKGPEIRTG+
Sbjct: 76 AATIKTIREAAEN------APFPVAIALDTKGPEIRTGM 108
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 331 WYSWEPWEKFIRATFMPVSIIFSSMVTSREAGPIVQMMPERRT*EALESMSR 176
+Y W P+ I A F + +IF SM++++ I++++ + E ES R
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFWSMLSTKSGINIIKLVETAQKAEGAESEER 148
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 331 WYSWEPWEKFIRATFMPVSIIFSSMVTSREAGPIVQMMPERRT*EALESMSR 176
+Y W P+ I A F + +IF SM++++ I++++ + E ES R
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFWSMLSTKSGINIIKLVETAQKAEGAESEER 148
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 29.9 bits (64), Expect = 0.89
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 443 CPDLRALSVQSDG-QGERCAKFRAIVFLSLATIPDGFGMVLMGTMGEVHSSYVHARFHHL 267
CP LR + S G Q +RC + +I F + G+GM + + V + F HL
Sbjct: 272 CPSLRTILCGSSGLQKDRCKRLLSI-FPQVTHFIQGYGMTELVVLSCV--TPFDDNFEHL 328
Query: 266 FQHGHITRG 240
GHI G
Sbjct: 329 GSCGHILPG 337
>AL132848-2|CAB60385.2| 333|Caenorhabditis elegans Hypothetical
protein Y47H10A.3 protein.
Length = 333
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 103 QDPQTSPANSWPP 141
+DP+T P NSWPP
Sbjct: 228 RDPKTMPPNSWPP 240
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 435 SPGP*CPERWPGRKVCQVSRYSFSQPRDNS*WFRH-GTHGNH 313
SP P R R + SRYS DNS W RH T+ H
Sbjct: 355 SPSPEPRHRSSSRDGYEQSRYSQRYEHDNSRWSRHNATYRRH 396
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 258 MLEKMMETGMNVARMNFSHGSHEYHAETIRNCRE 359
M +M T +V+RMN + HE A T+ C++
Sbjct: 234 MGNRMRATFQDVSRMNVLYNCHERCANTLNRCQQ 267
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 334 AWYSWEPWEKFIRATFMPVSIIFSSMVTSREAGPIVQM-MPERRT*EALESMSRPHIC 164
+W +W PW + VS +TS+ +G V+ + ++T E+ ++R IC
Sbjct: 25 SWAAWSPWSSCTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTCESKSRLARDTIC 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,423,872
Number of Sequences: 27780
Number of extensions: 254269
Number of successful extensions: 682
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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