Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D22
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0203 + 12986685-12988691 33 0.16
03_06_0078 + 31505126-31507933 31 0.63
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654... 31 0.63
01_06_0148 - 27007330-27008124 31 0.63
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 31 0.84
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.5
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 29 2.6
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 29 2.6
06_03_0937 - 26113346-26113645,26113721-26114193,26114436-26114724 29 3.4
08_02_1323 - 26136015-26137876,26138300-26139229,26139922-261400... 28 4.5
06_03_0355 + 19822110-19824491 28 4.5
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 28 4.5
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368... 28 5.9
10_06_0094 - 10604597-10605028,10605673-10605738,10606249-10606371 27 7.8
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 27 7.8
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775... 27 7.8
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 27 7.8
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 27 7.8
02_04_0485 + 23338980-23339187,23339277-23339305,23339962-233400... 27 7.8
02_04_0482 + 23291986-23292181,23292289-23292317,23293500-232936... 27 7.8
>06_02_0203 + 12986685-12988691
Length = 668
Score = 33.1 bits (72), Expect = 0.16
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +3
Query: 162 SCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAA 341
S L ++ T + V+ + + + T K D E T+L + + P+P+ + +AA
Sbjct: 459 SLLLEISTRAEGVVAAVDALGTTAKFKKA-DHAEPPATTTL---DAEAAMPVPNSNAIAA 514
Query: 342 EKAHQNLLEGVEHFDKTQMKHTTTEEKNSL 431
++AH N G EH K + TTT +++
Sbjct: 515 DEAHGNATAG-EHDKKETAEQTTTTSASTV 543
>03_06_0078 + 31505126-31507933
Length = 935
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 243 SLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMKHTTTEEK 422
S F G + TS K ++P+PD VV+ + A +++ + +EH + +
Sbjct: 536 SWFSGRKNVKKTSPKVLSKLRRSPIPDNHVVSFDAAVRSVSQELEHGKDFTEEDCSQNGI 595
Query: 423 NSLPPIEAIEAEKE 464
++ PI+ E E++
Sbjct: 596 KNVVPIKVSEIEED 609
>03_02_0985 - 12961787-12961984,12963177-12963337,12965332-12965489,
12966015-12966105,12966715-12966752,12966994-12967154,
12967249-12968687,12968815-12969227,12969630-12970987,
12971089-12971454,12971533-12971696,12971748-12971820,
12972967-12973113
Length = 1588
Score = 31.1 bits (67), Expect = 0.63
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 180 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQ-EKNPLPDKDVVAAEKAHQ 356
D EK + +DVA + K GIE D + K T + E N L D + ++
Sbjct: 927 DILEKTKRINDDDVAFHEKMKEHRAGIETLDLSGKKKTVKEWEDNRLSSMDHTSKGGDNE 986
Query: 357 NLLEGVEHFDKTQMKHTTTEEKNSL 431
NL E + K++ + ++ N+L
Sbjct: 987 NLNERLSKIKKSEARPEEVQDANAL 1011
>01_06_0148 - 27007330-27008124
Length = 264
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 299 PGEEPSA*QRCCRSGKGTSELTGRRRALRQNANEAHDDGREEFFTAN 439
P P++ +RC +SG S L RR + R +H DG+E+F N
Sbjct: 143 PSTTPASPRRCRKSGSTGSVLRWRRISERL-VRRSHSDGKEKFVFLN 188
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 30.7 bits (66), Expect = 0.84
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Frame = +3
Query: 201 LPSAEDV--ATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGV 374
L SAED+ A + F + K+D T + T+ E NP K ++ +AH+ L
Sbjct: 244 LESAEDIRSACHSNRAVCFLKLGKYDETIKECTKALELNPSYLKALLRRGEAHEKL---- 299
Query: 375 EHFDKT--------QMKHTTTEEKNSLPPIEAIEAEK 461
EH+D+ ++ + + K SL +E + AEK
Sbjct: 300 EHYDEAIADMKKIIELDPSNEQAKRSLFRLEPLAAEK 336
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 129 DLKSQLEGFNTSCLRDVDTNEKIVL 203
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 105 KDLPKVANDLKSQLEGFNTSCLRDVDTNEKI 197
K+L + +DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 105 KDLPKVANDLKSQLEGFNTSCLRDVDTNEKI 197
K+L + +DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>06_03_0937 - 26113346-26113645,26113721-26114193,26114436-26114724
Length = 353
Score = 28.7 bits (61), Expect = 3.4
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +3
Query: 123 ANDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQ 302
A+ + LE +SCL D + NE+ ED AT + + +E+ + + K E
Sbjct: 160 ASKPRCNLESAASSCLTDTNENERASARMMEDQATSSS-----NHMEEEEVSCEKSAEEY 214
Query: 303 EKNPLPDKDVVAAE-KAHQNLLEGVEHFDKTQMKHTTTEEKNSLPPIEAIEAEKETN 470
E P DV+ E A +LL+ V + Q+ EE ++ P E E +E N
Sbjct: 215 E-CCFPRMDVLEEEFHAELDLLQ-VNYGSDVQL--FLPEEHDAEQPDEITECREEFN 267
>08_02_1323 -
26136015-26137876,26138300-26139229,26139922-26140068,
26140139-26140360,26140513-26140555
Length = 1067
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +3
Query: 180 DTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHT-ETQEKNPLPDKDVVAA-EKAH 353
D E + D + + + + T+++ T +EK + + D ++ K H
Sbjct: 561 DYQEPNTVRGTRDFEEDTQNEEIIAEASSHNITAVQSTCNVEEKEQIEEFDSNSSCNKIH 620
Query: 354 QNLLEGVEHFDKTQMKHTTTEEKNSLPPIEAIEAEKETNK 473
+ GVE T + T +E N +E +E EK++N+
Sbjct: 621 EISSRGVEETKLTDVNVETADEINVASSLENVE-EKQSNR 659
>06_03_0355 + 19822110-19824491
Length = 793
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 168 LRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET---QEKNPLPDKDVVA 338
+ +V +++LP+ E+VATE + +E DA SL T +E +P+ D
Sbjct: 203 VEEVSVTHEVMLPNYEEVATEGDGDTAMAAVEN-DAGSLAETVVMTHEEFVAVPEDDEEE 261
Query: 339 AEKAHQNLLEGV 374
A+ +N G+
Sbjct: 262 ADGDEENDATGL 273
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 264 KFDATSLKHTETQEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMKHTTTEEK 422
K+D ++ E QEK K + K ++ VE K +M HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>02_05_0280 +
27435166-27435254,27436348-27436437,27436764-27436866,
27437318-27437377,27437745-27439148,27439227-27439328,
27439424-27439609,27439695-27439820,27439905-27440000,
27440509-27440574
Length = 773
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -1
Query: 259 IPSNRDFWVFSVATSSADGRTIFSFVSTSRKQLVLNPSS*LLRSLATFGKSFREGAS 89
+P ++ F + S+ SSADG T ++K L + S LRSLA+F + + +S
Sbjct: 149 LPYHQQFQLSSL--SSADGLTNIKTDPENKKLLENSASVESLRSLASFSSKYSQSSS 203
>10_06_0094 - 10604597-10605028,10605673-10605738,10606249-10606371
Length = 206
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 461 RDK*VPERHRKLRPDKAEAH 520
R + VP+R R+LRPD AEAH
Sbjct: 73 RHRRVPQR-RRLRPDAAEAH 91
>08_02_1236 +
25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 27.5 bits (58), Expect = 7.8
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +3
Query: 126 NDLKSQLEGFNTSCLRDVDTN--EKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTET 299
N L+++ + L D T+ ++ + S D A + S +EK D T++ TET
Sbjct: 543 NLLENRADDNREDALEDAFTSGIDEAAITSGVDEAAMEADAST---VEKNDDTAIDGTET 599
Query: 300 QEKNPLPDKDVVAAEKAHQNLLEGVEHFDKTQMKHTTTEEKNSLPPIEAI 449
+EK+ EK + ++L+G++ +E ++ P+E+I
Sbjct: 600 KEKH----------EKTNDDILQGLDLSKDNVECGVNGDEVSTFQPVESI 639
>07_03_0735 +
21075033-21075846,21077065-21077199,21077384-21077517,
21077604-21077814,21078033-21078270,21078346-21078496,
21078593-21078931
Length = 673
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 192 KIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKN 311
K VLPS E++A ++ S GIE+ + + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 335 RSGKGTSELTGRRRALRQNANEAHDDGREE 424
+SG GT + T RR++ EA +D +EE
Sbjct: 173 KSGTGTKKTTTRRKSPTSRKKEASEDMKEE 202
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +3
Query: 150 GFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDATSLKHTETQEKNPLPDKD 329
G NT+ N + P +E + + +G+ +L P P
Sbjct: 208 GVNTAGSNSDSVNNDLPRPDSESEIVQHIVEGRTEGVSNHSRANLSRENIPRVAPTPQNP 267
Query: 330 VVAAEK-AHQNLL 365
VVA +K H LL
Sbjct: 268 VVAIQKPKHDRLL 280
>02_04_0485 +
23338980-23339187,23339277-23339305,23339962-23340064,
23340311-23340482,23340880-23340940,23341257-23341389,
23341938-23342208,23342595-23342734,23342912-23342998,
23343078-23343586,23343671-23344488,23344522-23344720,
23345552-23345696,23345728-23345782,23347652-23347778,
23347867-23347936,23348448-23348553,23348636-23348747,
23349243-23349365,23349468-23349627,23349751-23349827,
23349925-23349977,23350151-23350205,23350500-23351174
Length = 1495
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 318 PDKDVVAAEKAHQNLLEGVEHFDKTQ---MKHTTTEEKNSLPPIEAIEAEKETNKFLNG 485
P KDV K +L E +H + + +KH T+E + + I+++++ + + +NG
Sbjct: 457 PSKDVELISKLKPSLPENKKHAGERRAKAIKHDTSENRAKIIEIKSLDSCETSGSAVNG 515
>02_04_0482 +
23291986-23292181,23292289-23292317,23293500-23293602,
23293855-23293979,23294788-23294920,23295468-23295739,
23295806-23295873,23296126-23296265,23296443-23296529,
23296610-23297118,23297203-23298020,23298054-23298252,
23299084-23299228,23299260-23299314,23301184-23301310,
23301399-23301468,23301980-23302085,23302168-23302279,
23302775-23302897,23303000-23303159,23303283-23303359,
23303457-23303509,23303683-23303737,23304032-23304706
Length = 1478
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 318 PDKDVVAAEKAHQNLLEGVEHFDKTQ---MKHTTTEEKNSLPPIEAIEAEKETNKFLNG 485
P KDV K +L E +H + + +KH T+E + + I+++++ + + +NG
Sbjct: 440 PSKDVELISKLKPSLPENKKHAGERRAKAIKHDTSENRAKIIEIKSLDSCETSGSAVNG 498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,315,425
Number of Sequences: 37544
Number of extensions: 331860
Number of successful extensions: 1040
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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