Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D20
         (258 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF399524-1|AAK95009.1|  216|Homo sapiens olfactory receptor prot...    30   1.2  
AB065783-1|BAC06003.1|  328|Homo sapiens seven transmembrane hel...    30   1.2  
BC004992-1|AAH04992.1|  478|Homo sapiens zinc finger protein 577...    28   6.2  

>AF399524-1|AAK95009.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 11  ERTSSLSECACAFGHFAVAIVT*LV*KQTVFTCNFVLLCFSFLYTCT*SSNVTLVRVRVV 190
           +RT S S C   F  F   +VT L+    +   +FV +C   LYT   S  +  + V V+
Sbjct: 22  DRTISFSGCLVQFFFFCTFVVTELILFAVMAYDHFVAICNPLLYTVAISQKLCAMLVVVL 81


>AB065783-1|BAC06003.1|  328|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 11  ERTSSLSECACAFGHFAVAIVT*LV*KQTVFTCNFVLLCFSFLYTCT*SSNVTLVRVRVV 190
           +RT S S C   F  F   +VT L+    +   +FV +C   LYT   S  +  + V V+
Sbjct: 91  DRTISFSGCLVQFFFFCTFVVTELILFAVMAYDHFVAICNPLLYTVAISQKLCAMLVVVL 150


>BC004992-1|AAH04992.1|  478|Homo sapiens zinc finger protein 577
           protein.
          Length = 478

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 2   HDGERTSSLSECACAFGHFAVAI 70
           H GER  S  EC  AF H +V I
Sbjct: 341 HTGERPYSCRECGKAFAHMSVLI 363


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,534,380
Number of Sequences: 237096
Number of extensions: 659666
Number of successful extensions: 2770
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 76,859,062
effective HSP length: 63
effective length of database: 61,922,014
effective search space used: 1362284308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)