Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D19
(294 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 36 0.004
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.047
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 33 0.047
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.047
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 33 0.047
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 32 0.062
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 32 0.062
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 32 0.082
Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical pr... 28 1.3
AC025715-11|AAP13753.1| 516|Caenorhabditis elegans Hypothetical... 28 1.3
AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical... 28 1.3
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 26 4.1
AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine re... 26 4.1
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 26 4.1
AL110500-17|CAE18040.1| 190|Caenorhabditis elegans Hypothetical... 26 5.4
AF038622-2|AAL06047.2| 177|Caenorhabditis elegans Hypothetical ... 25 7.1
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 25 9.4
U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical p... 25 9.4
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D + F+KDF+AG +AA+SKT +AP+
Sbjct: 14 DVIKFSKDFMAGATAAAISKTVIAPV 39
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 212 ADPVAFAKDFLAGGISAAVSKTAVAPI 292
+D FA D L GG+SA+VSKT VAPI
Sbjct: 16 SDAQKFAIDLLIGGVSASVSKTVVAPI 42
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.047
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D F D +GG +AAVSKTAVAPI
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPI 33
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 32.7 bits (71), Expect = 0.047
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D F D +GG +AAVSKTAVAPI
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPI 33
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.047
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D F D +GG +AAVSKTAVAPI
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPI 33
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.047
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D F D +GG +AAVSKTAVAPI
Sbjct: 8 DTKKFLIDLASGGTAAAVSKTAVAPI 33
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 32.3 bits (70), Expect = 0.062
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D F D +GG +AAVSKTAVAPI
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPI 46
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 32.3 bits (70), Expect = 0.062
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAPI 292
D F D +GG +AAVSKTAVAPI
Sbjct: 21 DTRKFLIDLASGGTAAAVSKTAVAPI 46
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.082
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 227 FAKDFLAGGISAAVSKTAVAPI 292
F D +GG +AA+SKTAVAPI
Sbjct: 12 FLVDLASGGTAAAISKTAVAPI 33
>Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical
protein T20G5.2 protein.
Length = 468
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 84 NLLIKNRGFVFRGFSIPVCAEVLP 155
++L G FRG+SIP C ++LP
Sbjct: 85 SVLDPEEGIRFRGYSIPECQKLLP 108
>AC025715-11|AAP13753.1| 516|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12b protein.
Length = 516
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 154 GRTSAHTGMEKPRKTNPRFLIRRFGVI 74
GR+ HT M R T+P L RF VI
Sbjct: 390 GRSGVHTHMTNTRITDPEILENRFPVI 416
>AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12a protein.
Length = 1187
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 154 GRTSAHTGMEKPRKTNPRFLIRRFGVI 74
GR+ HT M R T+P L RF VI
Sbjct: 1061 GRSGVHTHMTNTRITDPEILENRFPVI 1087
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 227 TRLDRRDSTFCSIMWSSLGGYLRTRKDFGTHGNGKT 120
T+ D + TF ++ S L GY T +G G GKT
Sbjct: 71 TQSDLYEETFRDLVDSVLNGYNATIFAYGQTGTGKT 106
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 227 TRLDRRDSTFCSIMWSSLGGYLRTRKDFGTHGNGKT 120
T+ D + TF ++ S L GY T +G G GKT
Sbjct: 71 TQSDLYEETFRDLVDSVLNGYNATIFAYGQTGTGKT 106
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 215 DPVAFAKDFLAGGISAAVSKTAVAP 289
D + +K LAG +AA+SKT AP
Sbjct: 9 DVLETSKKCLAGSAAAAISKTTTAP 33
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 227 TRLDRRDSTFCSIMWSSLGGYLRTRKDFGTHGNGKT 120
T+ D + TF ++ S L GY T +G G GKT
Sbjct: 71 TQSDLYEETFRDLVDSVLNGYNATIFAYGQTGTGKT 106
>AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine
receptor, class h protein78 protein.
Length = 353
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -2
Query: 176 LGGYLRTRKDFGTHGNGKTTKNEPPIFNQEIWSYFVITGAQG*CVPFLKFDRSRSLP 6
LGGY +K GN K P+FN WS FV P+L + +P
Sbjct: 45 LGGYCILQKSPSQMGNYKG-----PLFNLHFWSCFVDILYNTLIAPYLMYPALAGIP 96
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 227 TRLDRRDSTFCSIMWSSLGGYLRTRKDFGTHGNGKT 120
T+ D + TF ++ S L GY T +G G GKT
Sbjct: 34 TQSDLYEETFRDLVDSVLNGYNATIFAYGQTGTGKT 69
>AL110500-17|CAE18040.1| 190|Caenorhabditis elegans Hypothetical
protein Y87G2A.17 protein.
Length = 190
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 21 SIEFQKRHTLPLCSCDHEITPNLL 92
+I F +RH LP+ DH + N L
Sbjct: 164 AISFYRRHPLPIRGADHLVLKNQL 187
>AF038622-2|AAL06047.2| 177|Caenorhabditis elegans Hypothetical
protein R07C12.2 protein.
Length = 177
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 134 GNGKTTKNEPPIFNQEIWSYFVI 66
GNG T PP+F E +SYF +
Sbjct: 63 GNGATVL--PPLFQTESYSYFAV 83
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 143 GTHGNGKTTKNEPPIFNQEIWSYFVITGAQG 51
GTH NG ++P Q I + ++ GA G
Sbjct: 738 GTHTNGNHQHHQPHQLPQNIPHHMLLNGAAG 768
>U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical
protein F20A1.9 protein.
Length = 433
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 197 CSIMWSSLGGYLRTRKDFGTHGNGKT 120
C + W++LGG L K + G G T
Sbjct: 64 CRVGWATLGGSLNIGKGLDSFGYGGT 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,254,739
Number of Sequences: 27780
Number of extensions: 147528
Number of successful extensions: 376
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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